- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S154.g04321.01.t
Possible name(s)
CSMD3; SELE; SELP
Gene model
Location
S154 [27,837 / 38,652]
Amino acid sequence
Length: 783
>Phmamm.CG.MTP2014.S154.g04321.01.p
MMARLNVCCILVVVFFCLEASVAQPSPPNQCRVLSSVKNGERNCTNGTNGFREQCVFWCN
NGSRLVKGSTIRNCSCSAEGVCKWNGKHTFCEKIPKCRVLSPVENAERNCIKGNASYQEK
CTFQCKPGSRLLKGSLVRTCTCSQSACKWNGRHTFCEKIPTVPPPKCRAMSHGTNAVRTC
VKGNANYQQKCTFQCKPGFKLSRGSLIRTCTCSQSACKWDGKHVFCQKIQTIPPPKCRAL
SHGTNAMRTCVKGNASYQQKCTFQCKPGFKLSRGSLIRTCTCSQSTCKWDGRHTFCQKII
TPAPALDRRQRCSGRKGRLPRQSYPTPISFTPSSDSTKYDYHELLHKSLLFYDAQRSGYK
TNTSRVPWRGDSDLHDGCDVGRDLTGGWHDAGDHVKFGFPIASATTVLAWGMILFKDAYV
EAGEWQNALDNLKWSTDYFIKAHAAPNVLYGQVGGGVTDHDHWGRPEEATIRRPSFKITA
SSPGSDLAGETAAAMAASSIVFKAEGMASYATELLNHATELYQFASRYRGFYHKSIPDAT
EYYKSYDYKDEIVWACLWIYKATKSPVHLRDCTSKYNGFHMFYVASEFSWSSKTAGIQLL
MAESTNQQKYRDVADKFVVFARDTVPKTPGGLAFFGKWGSNRYAANAAFIALATAATTRS
RGATKWVNFARQQIYCLLGDGDNKRSYVVGFGTNPPTHVHHKASSCPTWRPGRHRICTWA
DFSSSRPNPHVLYGALVGGPDKNGRFSDTRKNYVINEVSCDYNAGFQSAIAGLKHFVMQS
RSG
Nucleotide sequence
Length: 2,792
>Phmamm.CG.MTP2014.S154.g04321.01.t
GTTCCATTGTGTACTTCACAACTGATTTCTGATGATGGCTAGATTGAATGTATGCTGTAT
TTTAGTTGTTGTGTTTTTCTGTTTAGAAGCAAGTGTCGCTCAACCTTCTCCACCAAACCA
ATGCAGGGTTTTGAGTTCAGTCAAAAACGGGGAAAGAAATTGCACTAATGGCACAAATGG
ATTTCGTGAGCAATGCGTGTTTTGGTGTAATAACGGATCCAGACTGGTAAAAGGCTCCAC
GATTCGTAACTGCTCTTGCTCAGCAGAAGGGGTTTGTAAGTGGAATGGAAAGCACACATT
CTGCGAGAAAATACCCAAATGCCGTGTACTGAGTCCTGTGGAAAACGCCGAACGCAATTG
CATAAAAGGAAACGCAAGTTACCAGGAAAAATGCACTTTCCAGTGTAAACCGGGTTCTAG
ATTGTTGAAAGGATCTTTAGTGCGAACTTGCACATGTTCCCAAAGTGCTTGCAAATGGAA
CGGACGCCATACGTTTTGTGAAAAAATTCCAACAGTACCGCCTCCTAAATGTCGAGCGAT
GAGTCACGGGACAAACGCAGTTCGTACTTGTGTCAAAGGAAACGCAAATTATCAGCAAAA
ATGTACTTTCCAATGTAAGCCGGGTTTCAAATTGTCAAGAGGTTCCTTAATACGAACGTG
CACATGTTCCCAGAGTGCGTGCAAATGGGACGGAAAGCATGTGTTTTGTCAAAAAATTCA
AACAATACCACCTCCTAAATGCCGTGCACTGAGTCACGGGACAAACGCCATGCGAACTTG
TGTCAAAGGAAACGCAAGTTACCAGCAAAAATGCACGTTCCAATGTAAGCCGGGTTTCAA
ATTGTCGAGAGGATCCCTAATACGGACTTGCACTTGTTCTCAAAGTACTTGCAAATGGGA
CGGACGTCATACGTTTTGTCAGAAAATTATAACTCCTGCCCCAGCACTGGACAGAAGGCA
AAGGTGCAGTGGCAGAAAAGGAAGACTCCCTCGTCAATCTTACCCCACTCCGATATCGTT
CACGCCATCTAGCGACTCAACGAAGTACGATTACCACGAGCTTCTGCACAAATCTTTGTT
GTTTTACGACGCACAGAGGTCAGGATATAAAACAAACACCAGTCGCGTCCCTTGGAGGGG
GGACTCGGACCTCCATGACGGCTGTGACGTAGGTCGTGACCTCACTGGTGGCTGGCATGA
CGCCGGCGATCACGTAAAATTTGGATTTCCAATTGCTTCTGCAACTACAGTATTAGCTTG
GGGAATGATTCTCTTCAAAGATGCCTACGTTGAGGCTGGGGAATGGCAGAACGCTCTTGA
TAACCTGAAGTGGTCAACTGACTACTTTATTAAAGCACATGCTGCTCCTAATGTGCTGTA
TGGTCAGGTTGGCGGTGGTGTGACTGATCATGACCATTGGGGAAGACCTGAAGAGGCAAC
GATTCGTCGGCCATCTTTTAAAATCACGGCATCGAGTCCGGGTAGCGATCTTGCCGGGGA
AACGGCAGCTGCTATGGCCGCCAGTTCCATCGTGTTTAAAGCCGAAGGAATGGCAAGTTA
TGCGACCGAGTTGTTGAACCACGCAACAGAGCTCTACCAATTTGCAAGTCGGTACAGGGG
ATTTTACCACAAATCTATACCTGACGCTACCGAATATTACAAATCTTATGATTATAAAGA
CGAAATAGTCTGGGCATGTTTGTGGATCTATAAAGCCACTAAGAGTCCTGTTCACCTCCG
TGATTGCACGTCGAAATATAATGGATTCCATATGTTCTATGTTGCATCAGAGTTTTCATG
GTCTTCGAAAACAGCCGGAATTCAGCTTCTGATGGCAGAATCCACAAACCAGCAGAAATA
TCGCGACGTTGCCGATAAATTTGTCGTCTTTGCACGTGACACGGTTCCCAAAACACCTGG
TGGTCTCGCCTTCTTCGGAAAATGGGGCTCTAACCGATACGCAGCAAATGCGGCGTTTAT
TGCCCTGGCAACGGCAGCCACAACGCGGAGCAGGGGCGCCACCAAGTGGGTGAATTTTGC
CCGCCAGCAGATCTACTGTCTTCTTGGCGACGGAGATAACAAGAGAAGTTACGTTGTAGG
CTTCGGAACAAACCCACCAACACACGTACACCACAAAGCAAGTTCTTGCCCAACATGGCG
TCCAGGGCGGCACAGAATCTGTACATGGGCCGATTTTTCGAGCTCCAGACCCAACCCCCA
TGTATTGTACGGAGCGCTTGTCGGAGGTCCGGACAAAAATGGACGTTTTTCTGACACTCG
AAAAAATTATGTTATCAATGAAGTCAGTTGTGATTATAATGCTGGATTTCAATCCGCCAT
CGCAGGTCTCAAACATTTCGTCATGCAAAGTCGCTCGGGATGACGTCATAATTCTACTTC
TTTCACAAATGCTTTCTACTAAACAGTAAAAAATCATTACCAAACACACACAAATATGTT
TTGCGGTCAGCCAAACGTTTTTTGTTTTTGGTCAAAACGCCGATTTTCAGCCGCAAAAAG
TGTTTTGCCAAGGGTACATACATCGTTTATGCTTGCGACTTCATATATTTCGTCGTGTAC
GTTTTGTAATTAAATCTATTGTGACTCATGCTGTTTTGTAAACCTTTACATGATATCATC
AACCTGTGTTGCAAGTACCTTTGTATAACAGTCGGTTGCTTATTGCATGTATTTGATTGT
ATCAATTAATTATCATAAACAATGCATAACACAAAGCGTTGTATTGTTCTAACAATCAGG
GCGTTCGATAATACACAGCTGAAATCACGACG
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[30-93] 4.73E-6 - T[96-165] 1.95E-7 - T[166-234] 1.53E-7 - T[236-304] 2.5E-8 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[31-92] 2.48929E-4 - T[97-157] 2.59522E-6 - T[167-227] 1.57272E-6 - T[237-297] 9.81688E-7 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[31-91] 0.53 - T[97-156] 9.6E-5 - T[167-226] 0.0019 - T[237-296] 2.3E-4 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[89-158] 7.754 - T[165-228] 7.878 - T[235-298] 8.054 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[97-152] 4.6E-4 - T[167-222] 1.2E-4 - T[237-292] 1.9E-4 |
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[337-777] 1.6E-167 |
| SUPERFAMILY |
6-hairpin_glycosidase_sf (IPR008928) - T[338-774] 3.23E-137 |
| Pfam |
Glyco_hydro_9 (IPR001701) - T[341-769] 2.2E-130 |
| ProSitePatterns |
Glyco_hydro_9_Asp/Glu_AS (IPR033126) - T[746-764] . |
| Protein Name | Identity | Bit Score | e-value |
|---|