- Transcript 'KH2012:KH.L133.9.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S154.g04335.01.t
Possible name(s)
SALL1; SALL3
Gene model
Location
S154 [202,775 / 207,651]
Amino acid sequence
Length: 915
>Phmamm.CG.MTP2014.S154.g04335.01.p
MPNYPFGEYSNSEQRQIEMQNQESNRQHYTSPLGGAQESLAPEEERHQYSRYHNNEQTPP
PYHQQPDHHSPTPAPPSLQDHSRTNGNHAFNESDSQLCIDEDQEVGDENGLLQDQHQKPS
SECSDGLEPNVSPALVSPEVDENDQMSGVIASSPPTVDGSSTRKRSDSSPEKQSEIQALR
EQINMIQQQHAYQIQMIQYLQWQLNILSQQRQQQQPDRSMASLGNLPFAGMMPNMTSSAS
DPAKIASLAAAASLTTANGARPGGSPPGNPRERLDDVAMRQAMTSPEEKREPIFGTRMGS
SPRRNAEDSRNPFTQAMQQQSTPFSSLVNGFGRSGSSLPDHVTALLRKNIASGLAGDASN
MKSFSKMDASAVSPPEMPRKVTSSNGGVSASERPYQCDLCSRAFTTRGNLRTHYSSVHRR
ELPPASASSATSIGRRGGNAAQRSHACPLCSNVFDDQAAFAQHMQIHALANKQQQDQLFA
MKQQLAQQDHPTMVPGRPLPSLQPPALPQLSPPVDMTSRNDVTKPPLMSQRPESPIERKN
ESRPMVVKSEPNTLPRDGARDTSALDLSHPSSASSSNGLMNEKVVDSSAGNSPTDLSEGR
SPPSRYREEEMNFSQQRHQQILAAQHESALKTLKEENERYNDEQPMQLVRPVLDSASCGS
PSSESSSVDQQRSMLSEEQRYALKRPFGDDDSSSNPDAKRHSQPRHWCDLCKKQFSSASS
LQIHTRTHTGEKPYSCNVHMGTHVWGAGGSRRGRRVSMDNPIMSSWMKNSTSVDHVTSGM
QAAEAGSVAPPRDTSTAAVASMYQQYAALAQGLMNRNHGDSRYPSNPMMNLNPAALVASR
YLQQQQQPVPLTAENRSTEGKFFIFPRSPEDRATENSLSSDGEAEPSDASGNTSVNAAHE
WLWKAYQRTQGQVGN
Nucleotide sequence
Length: 2,748
>Phmamm.CG.MTP2014.S154.g04335.01.t
ATGCCAAATTACCCCTTTGGGGAATATTCTAACAGTGAGCAACGACAGATAGAGATGCAA
AATCAAGAATCAAATAGACAACATTACACCTCGCCTCTGGGTGGAGCTCAGGAGTCACTT
GCCCCTGAAGAGGAGCGACACCAGTACTCAAGGTACCACAACAACGAACAAACACCACCA
CCGTACCATCAGCAACCAGATCACCATTCGCCAACACCAGCACCACCATCTCTACAGGAC
CATTCTCGAACCAACGGAAACCATGCTTTTAACGAAAGTGACAGCCAGCTTTGCATCGAT
GAGGACCAAGAGGTTGGTGATGAAAACGGACTCCTGCAGGATCAACATCAAAAACCATCC
TCTGAGTGCTCTGATGGTTTAGAACCAAATGTATCACCAGCACTGGTGTCTCCGGAGGTT
GATGAAAATGACCAGATGTCTGGTGTGATCGCCTCCTCTCCACCAACAGTTGATGGTTCT
TCCACCAGAAAGAGGAGTGATTCCTCTCCGGAGAAGCAGAGTGAGATTCAAGCTCTCCGG
GAGCAGATAAACATGATCCAGCAGCAACACGCTTACCAGATTCAGATGATACAATACCTG
CAGTGGCAGCTTAACATACTTTCACAGCAGCGACAACAGCAACAGCCCGACAGGTCCATG
GCTTCACTTGGCAACCTTCCTTTCGCAGGGATGATGCCCAACATGACGTCATCGGCGTCT
GATCCGGCAAAAATCGCTTCCCTGGCCGCTGCAGCGTCTTTGACCACAGCCAACGGCGCC
AGACCTGGTGGGTCCCCACCTGGGAATCCCCGTGAACGGTTGGATGACGTAGCTATGCGA
CAAGCCATGACGTCACCAGAGGAAAAGCGAGAGCCCATATTCGGGACAAGAATGGGCTCA
TCGCCACGTCGTAATGCAGAAGACTCAAGAAATCCATTCACACAAGCCATGCAGCAACAG
TCAACACCATTTTCAAGTCTCGTCAACGGATTCGGCCGTTCAGGAAGCTCCCTACCTGAT
CACGTGACCGCTTTGTTGCGCAAAAACATTGCGTCGGGTTTGGCCGGTGACGCCAGCAAC
ATGAAGTCGTTTTCAAAGATGGACGCGAGCGCTGTGTCGCCGCCCGAGATGCCGCGCAAG
GTGACTTCATCAAACGGTGGAGTTTCGGCGAGTGAACGTCCCTACCAATGTGACCTGTGC
TCTCGAGCTTTCACCACTAGAGGGAACCTTCGCACACATTACAGCAGCGTGCACAGACGG
GAACTACCTCCGGCCTCAGCCTCAAGTGCGACATCTATTGGCAGACGCGGTGGCAATGCA
GCTCAGCGCAGTCATGCCTGTCCGTTGTGTAGCAACGTGTTTGACGACCAGGCAGCATTT
GCACAGCATATGCAGATTCACGCACTGGCCAATAAACAACAACAGGATCAGTTGTTCGCG
ATGAAACAGCAGTTGGCCCAACAAGATCATCCTACAATGGTCCCCGGCCGACCCTTGCCC
TCTCTGCAGCCCCCCGCACTCCCTCAACTTAGTCCTCCTGTCGATATGACGTCACGCAAC
GACGTCACAAAGCCACCACTGATGTCACAGCGCCCGGAATCACCGATCGAGCGAAAAAAT
GAATCACGACCTATGGTGGTGAAAAGCGAACCAAATACATTGCCACGGGATGGCGCCAGA
GACACCAGTGCTTTGGATTTGTCTCATCCGAGCAGTGCAAGCAGCAGTAATGGTTTGATG
AATGAAAAGGTTGTCGATAGTTCGGCTGGCAATTCGCCGACGGATCTTTCGGAAGGTCGC
AGTCCACCTAGCAGATACCGTGAAGAAGAGATGAACTTTTCTCAGCAGCGTCATCAACAA
ATTTTGGCTGCCCAACACGAATCTGCTTTGAAAACATTGAAAGAAGAAAATGAGCGCTAC
AACGACGAACAACCCATGCAGTTGGTGCGACCTGTACTCGACAGTGCCTCTTGTGGCAGC
CCTTCAAGCGAGTCGTCGTCAGTTGACCAGCAAAGATCGATGCTCAGTGAGGAACAACGC
TATGCCTTGAAGAGACCATTTGGTGATGACGACAGTTCCAGTAACCCGGATGCGAAACGT
CACAGCCAGCCACGTCACTGGTGCGATTTGTGCAAGAAGCAATTCTCTTCGGCGAGCTCC
TTGCAAATCCACACTCGCACTCACACTGGAGAAAAGCCCTACTCTTGCAACGTACACATG
GGGACCCACGTATGGGGGGCCGGGGGCTCCAGACGGGGGCGTCGCGTCTCAATGGACAAC
CCCATTATGTCGTCATGGATGAAGAATTCCACCAGTGTCGATCACGTGACTTCCGGTATG
CAAGCGGCAGAAGCAGGCTCTGTGGCGCCACCTAGAGACACCAGTACTGCAGCGGTGGCT
TCAATGTATCAACAATACGCAGCTCTTGCTCAAGGTTTAATGAACCGTAACCATGGTGAT
TCGCGGTATCCTAGCAACCCGATGATGAATTTAAATCCAGCTGCTCTTGTAGCATCTCGA
TATCTTCAGCAACAACAACAACCGGTTCCTCTTACAGCCGAAAACCGATCCACCGAAGGC
AAGTTTTTCATCTTTCCAAGATCCCCAGAAGACCGAGCAACAGAGAACAGTTTGTCATCT
GATGGTGAAGCTGAACCGAGTGACGCATCGGGCAATACTTCGGTGAACGCGGCCCATGAA
TGGTTGTGGAAAGCTTACCAAAGAACACAGGGACAGGTGGGAAATTAA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[391-422] 3.77E-9 - T[705-737] 2.42E-10 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[395-418] 3.1E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[395-423] 13.339 - T[445-472] 9.12 - T[706-733] 15.189 |
| SMART |
Znf_C2H2_type (IPR013087) - T[395-418] 3.4E-4 - T[445-467] 0.0037 - T[706-728] 0.31 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[397-418] . - T[447-467] . - T[708-728] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SALL1_HUMAN | 40.152 % | 91.7 | 1.03E-18 |
| SALL3_HUMAN | 39.098 % | 85.9 | 5.72E-17 |