- Transcript 'KH2012:KH.L153.100.v...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C2.209.v2....' >
- Transcript 'KH2012:KH.C1.1022.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1555.g15101.01.t
Possible name(s)
CNGA1; CNGA2; CNGA3
Gene model
Location
S1555 [23,871 / 30,601]
Amino acid sequence
Length: 792
>Phmamm.CG.MTP2014.S1555.g15101.01.p
MSDTAIEVDSELKEDLDRQLETAQRKSSQQLAENMEKTKSAYTLQEGGNPDAYCSETISC
ETISWYNPYLRNFETALCFLVILCLFFNSYMFFFVAEMAMYNTALAADVFYIFHMFLRSR
TGHMIDGVEERNLLKIRERYQTSIAFYLDLLSMIPLSQLRAFLPGSDQLYYALGRQKQYV
RLHFVLYYLGIREEEPGSSTFIYRSLKYVLLSLLTIHFLACGWYGLACSRYDESGFDLTL
CGGQSWIMHLPRHIIEKVLAVTQNEDATMKSEVSFLHNTYVTSFYWSTATATSTGYGDVH
AWTVEEKIYSIFAMIIGMLVLYGMTMGGMTSMLTNMDARRSSFVQRYKAFENEVKRMGIT
DNVKDLCLRYFDYLWHRWEGENVQGSGVLNLLPESLRASFAEATFHRLVRKADLLEKTED
AFCRNLALVSQPMVYLENQFVQRSGEIASNMCYIQHGIVEVLDSDEEDVVAMMQAGKLFG
QILLVFDLPRINSIRCKTNCDIFVLNKHDFRMVLSEYPEAAKQFCDAAREKCEGPSKQWP
MDPPEFSDFSNFIEKTSAAKRRHTVITGQKSSGPSDIPDVSMARRMTTVYSTDYEGVDLS
RVRMHKTKARMDLEEVLTSDAPRPSLVDFVLNGEPQKTGKRSATKLGNDTEMIAANANYE
DLKEAVGPNAEYKDPDVTTFKERLFNLTIINPKGYFYAFWLNYIFCIALFTGLYTTLIAF
FSTTPGMETMYNGTAAESLDLLHIAGYMCDNSSDVYTSTCGSLTEFSAIADCLMGVGGTF
GSMIKSYTGGYS
Nucleotide sequence
Length: 2,379
>Phmamm.CG.MTP2014.S1555.g15101.01.t
ATGTCGGACACGGCAATTGAAGTGGACAGTGAACTTAAAGAGGACTTGGACCGACAGCTT
GAGACGGCGCAGCGGAAAAGCAGCCAGCAACTTGCTGAAAACATGGAAAAGACCAAGAGC
GCATACACGCTGCAGGAAGGTGGAAATCCTGACGCCTATTGCAGTGAAACCATCTCGTGT
GAAACCATCTCGTGGTACAACCCGTACCTGCGTAACTTTGAAACAGCGCTGTGCTTTTTG
GTCATTCTATGTCTCTTCTTCAACTCCTACATGTTCTTTTTTGTTGCCGAAATGGCCATG
TACAACACTGCCCTTGCAGCTGACGTTTTCTACATCTTTCACATGTTCCTTCGGTCAAGG
ACAGGGCATATGATCGACGGAGTTGAGGAGAGAAATTTGTTGAAGATTCGGGAGAGATAT
CAAACCAGCATTGCATTCTACCTCGACCTGTTGTCTATGATCCCACTTAGTCAGCTGCGA
GCGTTTTTGCCTGGAAGTGACCAGTTGTACTACGCTTTGGGACGACAAAAGCAGTACGTC
AGGCTGCATTTTGTGCTCTACTATCTTGGCATCAGAGAGGAGGAACCCGGGTCCAGTACC
TTTATTTATCGAAGTTTAAAATACGTTTTATTGTCGCTTTTGACAATCCATTTCCTGGCG
TGTGGGTGGTATGGATTGGCCTGCTCTCGTTACGATGAAAGCGGATTTGACCTGACACTT
TGTGGAGGCCAGAGCTGGATCATGCATCTGCCAAGACACATCATCGAGAAAGTACTAGCA
GTGACGCAAAACGAGGATGCGACCATGAAAAGTGAAGTCAGTTTTCTGCACAACACATAC
GTGACCAGTTTTTACTGGTCCACAGCAACAGCCACATCAACCGGCTATGGAGACGTACAC
GCTTGGACTGTGGAAGAAAAAATATACTCCATATTTGCTATGATAATAGGTATGTTGGTG
TTGTACGGAATGACTATGGGAGGAATGACATCCATGCTGACCAATATGGATGCCAGACGC
TCAAGCTTTGTGCAACGATACAAAGCATTTGAAAACGAAGTGAAACGGATGGGTATCACC
GATAATGTGAAGGACCTTTGTTTGAGATACTTCGACTACTTATGGCACAGATGGGAAGGT
GAAAACGTGCAAGGAAGCGGGGTGCTTAATCTTCTTCCCGAATCTCTAAGAGCTAGCTTT
GCGGAGGCCACCTTTCATCGCTTAGTGCGAAAGGCTGATCTTCTCGAAAAGACAGAGGAC
GCATTCTGTCGAAATCTTGCGTTAGTCTCCCAGCCTATGGTGTACCTGGAAAACCAGTTC
GTTCAAAGATCTGGAGAGATAGCCAGCAACATGTGTTACATACAACACGGCATTGTTGAG
GTTCTTGATTCTGACGAAGAGGATGTAGTAGCCATGATGCAAGCTGGTAAACTTTTCGGG
CAAATTCTCCTGGTATTTGATCTTCCTCGAATCAATTCCATCCGCTGCAAGACCAATTGC
GACATCTTCGTGTTAAACAAGCACGATTTTAGAATGGTGCTTTCTGAATACCCAGAAGCT
GCCAAGCAATTCTGCGATGCGGCTCGGGAAAAATGTGAAGGTCCTTCAAAACAGTGGCCA
ATGGACCCGCCAGAATTTTCAGACTTCAGCAACTTTATCGAAAAGACTTCAGCTGCTAAA
CGGCGCCACACAGTCATCACTGGACAGAAATCTTCTGGACCTTCTGACATACCGGATGTT
TCAATGGCTCGACGAATGACCACCGTGTATTCGACCGATTACGAGGGTGTTGATTTATCT
CGGGTCCGTATGCACAAGACAAAGGCACGAATGGACCTCGAGGAAGTCTTAACTAGTGAC
GCTCCCCGACCGTCGCTCGTGGATTTCGTGCTAAATGGTGAACCCCAGAAAACCGGTAAA
CGTTCAGCGACCAAGTTAGGAAACGATACTGAGATGATTGCAGCCAATGCTAACTACGAG
GACCTAAAGGAAGCGGTTGGACCTAATGCCGAGTATAAGGACCCCGACGTGACTACTTTC
AAAGAAAGGCTCTTCAATCTGACAATCATCAACCCTAAGGGCTATTTCTACGCGTTCTGG
CTCAATTACATCTTCTGCATAGCTCTCTTCACTGGCCTCTACACCACCCTTATCGCATTT
TTCTCCACAACACCTGGAATGGAAACCATGTACAACGGCACAGCCGCCGAATCGCTGGAC
CTACTTCACATTGCCGGATATATGTGTGACAACTCATCGGATGTATACACGAGCACGTGT
GGCAGTCTGACTGAATTTTCGGCCATTGCTGATTGTCTCATGGGTGTGGGCGGCACATTT
GGTTCCATGATCAAGTCCTACACTGGCGGCTATTCGTAA
| Pfam |
Ion_trans_dom (IPR005821) - T[72-339] 4.2E-15 |
| PRINTS |
K_chnl_volt-dep_EAG/ELK/ERG (IPR003938) - T[214-224] 6.6E-10 - T[280-297] 6.6E-10 - T[306-317] 6.6E-10 - T[494-502] 6.6E-10 |
| SUPERFAMILY |
cNMP-bd-like (IPR018490) - T[338-528] 1.15E-33 |
| Gene3D |
RmlC-like_jellyroll (IPR014710) - T[382-536] 6.8E-31 |
| SMART |
cNMP-bd_dom (IPR000595) - T[414-529] 1.8E-9 |
| ProSiteProfiles |
cNMP-bd_dom (IPR000595) - T[414-514] 18.964 |
| CDD |
cNMP-bd_dom (IPR000595) - T[424-524] 1.21603E-16 |
| Pfam |
cNMP-bd_dom (IPR000595) - T[434-517] 3.0E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CNGA3_HUMAN | 25.159 % | 143 | 1.68E-35 |
| CNGA1_HUMAN | 25.688 % | 149 | 1.42E-37 |
| CNGA2_HUMAN | 26.16 % | 154 | 5.09E-39 |