Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S155.g04338.03.t

Possible name(s)

SYAP1

Gene model

Phmamm.CG.MTP2014.S155.g04338

Location

S155 [14,403 / 20,699]

Sequences

Amino acid sequence

Length: 409

>Phmamm.CG.MTP2014.S155.g04338.03.p
MAMFNSNLTSSLSGWFTNKFQPNPEDSSATNEEKSQTEENIKQTPEEEVSEKPVETEKDD
NKVESEETNNEETSTETTNSLDKMLDIDTEQMQKKLAEETQKVVSSAMSFGNYLFGVATE
ASKKMSTTVNETAQTLKKTVEDKTILGDLNREQDEFIRQKREKQGDGAVPPWCGYQEEET
MKQQILALSTDTRNFLRSPPSGVQFNFEFEQMFPIAKATLKEDENLKKMRFTLVPTKIKE
ELFWRNYFYRVSLIKQSAQLSSLTELQKTGAGEAASSASSTSSIVMVGSTATGTMSRSSS
NKSLNRSDAETAGAESHDTADINEPDQELPAAEFASDAFDPSTLNPDDLEREMRELGMDD
GGTDIPEWEHELQKELQDYEVVNGEGKDDMWEKEIDDMLNADAEQVKSS

Nucleotide sequence

Length: 1,230

>Phmamm.CG.MTP2014.S155.g04338.03.t
ATGGCAATGTTCAATTCAAATTTGACATCAAGTTTGTCTGGTTGGTTTACAAACAAATTC
CAACCAAACCCAGAAGATTCTTCTGCAACAAATGAAGAGAAATCCCAGACTGAAGAAAAT
ATAAAACAAACTCCAGAGGAAGAAGTATCTGAAAAACCTGTAGAAACAGAGAAGGATGAT
AACAAGGTGGAAAGCGAGGAAACCAATAATGAAGAAACATCAACTGAAACTACAAATTCT
TTGGACAAAATGTTGGACATTGACACAGAACAAATGCAGAAAAAACTGGCGGAGGAAACA
CAGAAAGTTGTGTCATCAGCAATGTCATTTGGAAACTATCTGTTTGGTGTTGCCACTGAG
GCATCAAAGAAGATGTCAACTACTGTTAATGAAACAGCACAAACTCTGAAGAAAACTGTA
GAAGACAAGACAATTTTGGGTGATCTTAATCGTGAACAAGATGAGTTTATTCGACAAAAG
CGAGAAAAGCAAGGTGATGGGGCTGTTCCACCATGGTGTGGATACCAAGAAGAAGAAACT
ATGAAACAACAGATCCTGGCTTTATCAACTGACACACGAAACTTTCTTCGTAGCCCCCCA
TCAGGTGTTCAATTCAACTTTGAGTTTGAACAAATGTTTCCAATTGCCAAAGCCACCTTA
AAGGAAGATGAAAACCTAAAAAAGATGAGATTCACCCTAGTGCCAACCAAGATTAAGGAA
GAACTTTTCTGGCGGAACTATTTCTACCGAGTATCCCTGATCAAGCAATCTGCCCAGCTG
TCGAGTTTAACAGAATTGCAGAAGACAGGAGCAGGTGAAGCTGCGTCATCTGCATCATCC
ACCTCTTCTATTGTAATGGTGGGAAGTACAGCAACAGGAACAATGAGCCGTAGTAGCAGC
AACAAATCCCTTAACAGATCTGATGCAGAAACTGCTGGTGCAGAATCCCATGATACGGCT
GATATTAATGAACCTGATCAGGAACTGCCCGCCGCCGAATTTGCCTCCGATGCGTTTGAC
CCCTCAACTTTGAACCCTGATGACCTCGAACGTGAAATGCGTGAACTTGGAATGGACGAT
GGTGGAACAGATATACCTGAATGGGAACATGAACTCCAAAAAGAACTTCAGGACTACGAA
GTAGTAAACGGCGAAGGCAAGGACGATATGTGGGAAAAAGAAATCGATGATATGTTAAAT
GCGGATGCCGAACAAGTCAAGTCCAGTTAG

InterProScan

Gene3D	BSD_dom_sf (IPR035925) - T[170-266] 8.6E-43
SMART	BSD_dom (IPR005607) - T[203-255] 3.4E-9
ProSiteProfiles	BSD_dom (IPR005607) - T[203-255] 13.384
Pfam	BSD_dom (IPR005607) - T[205-257] 3.8E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SYAP1_HUMAN	45.397 %	250	3.43E-80