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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1563.g15119.01.t

Possible name(s)

CWF19L1; CWF19L2; DBR1

Gene model

Phmamm.CG.MTP2014.S1563.g15119

Location

S1563 [12,037 / 15,516]

Sequences

Amino acid sequence

Length: 510

>Phmamm.CG.MTP2014.S1563.g15119.01.p
LCVGDFFGDGVVSKNAWQEYKSGAKLPPLPTYILGPNSIQQLSHFEENQDAGFELCENIT
FLGKKGLFTTSTGLRIAYLSGCESPDVGPKQPHCFTAGDAQTITASLDTSNAEFKGVDIL
ITSVWPKNVTSYGNPPISDNCKSCGSPIVAQLCKDIRPRYHFAALEGIHYERVPFRNHTV
LAENARHVTRFIALAPVGNTSKQKYLYAFSIMPMVKMNAAELIQQPPDTTESPFKVQTSK
TTPANSNNGEINQYRWNMDQPQGNNRKRKSNNNFNNPPRKQSRPQDWSCWFCLGGEKVEK
HLVASVGELCYVALAKGGLTWDHVLVLPIAHHPSSLDLPDDTVEEAKKYKQALVKAFKED
GRSCIFFERCYRTDHMQIQAIPLPKDTDCETVKKEFFKLAESHRDRQGKPAPLELTELPK
QTDLKQILPAGCPFFHVELPDGSRLLHRIQRYFPLQFGREALCSSSILNMRDRVDWRSCM
TSRDQETDAAKRFRSFFEKHDFTADDEDDV

Nucleotide sequence

Length: 1,624

>Phmamm.CG.MTP2014.S1563.g15119.01.t
CTTTGTGTTGGGGATTTCTTTGGTGATGGGGTGGTATCTAAAAACGCTTGGCAAGAGTAT
AAATCTGGCGCTAAGCTACCGCCTTTGCCAACTTACATTTTGGGACCAAACAGTATTCAG
CAGCTATCTCACTTTGAAGAAAATCAAGACGCAGGATTTGAATTATGTGAAAACATTACA
TTTTTAGGCAAAAAAGGATTATTCACCACATCAACAGGCCTCAGAATAGCATATCTCAGT
GGCTGTGAATCACCTGATGTTGGCCCAAAACAACCACATTGTTTTACGGCTGGTGATGCT
CAGACAATCACAGCCTCATTGGACACTTCCAATGCTGAGTTCAAGGGGGTTGACATCCTG
ATCACCTCGGTCTGGCCAAAAAATGTGACATCATATGGCAATCCTCCGATATCTGACAAC
TGCAAATCATGTGGTTCACCAATAGTGGCTCAGCTGTGTAAAGATATTAGACCAAGGTAT
CACTTTGCTGCCCTGGAAGGCATCCATTATGAAAGAGTGCCATTCAGAAATCACACTGTA
TTAGCAGAAAATGCTCGTCATGTCACAAGATTTATTGCACTAGCTCCTGTTGGAAACACT
TCCAAGCAAAAGTATCTTTATGCATTTTCAATAATGCCGATGGTCAAAATGAACGCAGCA
GAGCTAATTCAGCAACCTCCAGACACAACAGAATCACCTTTTAAAGTGCAAACAAGCAAA
ACAACTCCTGCAAATTCAAACAATGGTGAAATAAATCAATACCGGTGGAACATGGATCAG
CCCCAGGGAAACAATAGAAAGAGAAAATCAAATAACAATTTTAACAATCCTCCCAGAAAG
CAATCTCGCCCACAGGATTGGTCTTGCTGGTTTTGCCTTGGTGGTGAAAAAGTGGAAAAA
CATTTGGTGGCAAGTGTTGGAGAGCTGTGTTATGTTGCATTGGCAAAAGGTGGGCTAACT
TGGGATCATGTTCTGGTTCTTCCTATTGCTCACCATCCCTCCTCACTTGATCTTCCCGAT
GACACAGTGGAGGAAGCTAAAAAGTACAAACAAGCCTTGGTTAAGGCATTTAAAGAAGAT
GGTCGATCTTGCATATTTTTTGAGCGGTGTTACAGAACAGATCACATGCAAATTCAGGCA
ATTCCCCTTCCTAAAGATACAGACTGTGAGACTGTAAAAAAGGAATTTTTTAAACTTGCC
GAAAGTCACAGGGACAGACAAGGCAAACCTGCACCTCTGGAACTAACTGAATTACCCAAA
CAAACTGACCTGAAACAGATTCTTCCTGCTGGGTGTCCCTTCTTTCATGTGGAACTTCCA
GATGGTTCTAGACTTCTTCACAGAATCCAAAGATATTTTCCTCTTCAATTTGGAAGAGAG
GCACTTTGTTCTTCGTCGATTCTGAACATGCGCGATCGAGTTGACTGGCGCTCATGCATG
ACATCACGTGACCAGGAAACAGACGCAGCAAAACGTTTTAGGAGTTTCTTTGAAAAACAC
GATTTTACCGCTGACGATGAAGATGACGTGTGACGTTTTATAGTTTTTATCATTTTTGTT
GTGTGAAGTCTTCTTGGAATTTTAATGCGGTTTTAATACCATTTTAAAAGGTTTCAAAGG
AAAC

InterProScan

Gene3D
HIT-like_sf (IPR036265) - T[252-407] 5.1E-9
Pfam
Cwf19-like_C_dom-1 (IPR006768) - T[280-387] 4.7E-30
SUPERFAMILY
HIT-like_sf (IPR036265) - T[284-387] 1.09E-8
Pfam
Cwf19-like_C_dom-2 (IPR006767) - T[415-503] 1.6E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
C19L2_HUMAN 29.596 % 89.4 1.17E-18
C19L1_HUMAN 45.841 % 462 5.2E-159