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  1. Transcript 'Harore.CG.MTP2014.S1...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1629.g15288.01.t

Possible name(s)

NLRC3; NLRP12; NLRP3

Location

S1629 [16,659 / 26,640]

Sequences

Amino acid sequence

Length: 1,076

>Phmamm.CG.MTP2014.S1629.g15288.01.p
MEHNDTESDIQHGDDRNQIVSTTGQYLASTSNPNQPFQLQEPETPINFHQPQNPNISLYP
NQAVPPPQQTGARNQFDAAAVRGNISNSQQFRHQLSWNTRPTFSSAFQQLYAPFNPTLVG
TQKVTCASFFPSMIPALCWNRQSSALNSAQTVVLPNPKFDYTSVLAKQLDKTNEIPPSNP
STMLEPQLPTMHSTLVQSPSQSHDIKVQEPLVQPQFSGSNLTNCTFNIAGGDINTCNTGL
QPSSAIDQSNMGAVDQSNIDLAAAKGCLTTSAKQQCSSKNILRITKQKIEICPTEITDKP
SRMLKPAIYDTIRKLENQHRPSLYTDDDDNGHYNRRKEYEKINFKEKSKVSVESLFRLAA
EQASESNIPECQGNVVALIGQPGIGKTTLSKVITENILQNKMENITNIDWVFYISVKKID
FQKPVTLVDFLLKHSMNVTQYNKLKGKGCSSLQETILKEILESKNVFIAFDGLDEASTEW
DLEYKGGLNLREKNNPLLYLYGLMNGDILPEAKKLFTSRQNHYFSIDQNCRPQFVAEVLG
LNTKSQESLCKQICPDHQDQVWKITESNPNLSYSCYVPAKCVFIVYAIWKSLKEDSSERF
HSLTHIFAQGFKYYFADGFVKGIVKDKKYMDKISKLAWNGFKMKKLIFEEEDLNEVGIDT
KTFIDILSAFVGEENWGMKILDCDRKSNFSHLIWQEYFAACYLVYFSSVDEFCELIPQFK
SDRWEVVTKFVFGLCNSDVNKVAKTGFWTRKQNKEEFLAKKSKLFELVCDEMKDLGAKQL
NAHLQIFSWLQEINDEKFYQKAVPYLSDSFSLDGTILLTDVSSISKLRRFDFSERNIDDK
TASAIALYVHNIEELSINHCNVADDGICQITKAIFCLSQPIRLLRVWRNKVTDEIAIAIA
SCIHNIEKLDLENCQLTSVGICIIAKAVSSLLQPMQALNLGMNKLCDQDASSIASCIYNI
KELYLDHCQLTSVGISNISNAISNFQQPMQKLDLFGNRIDEETAKSLLGCLHNIKDELRL
RKSIISKEFESNYLLVLEPSLSLSTYCMGKLYRTTSNLWGGTKYRMWPHVTACDSS

Nucleotide sequence

Length: 3,231

>Phmamm.CG.MTP2014.S1629.g15288.01.t
ATGGAGCATAATGACACAGAAAGTGATATTCAACATGGTGATGACCGAAATCAGATTGTT
TCAACAACTGGACAATACTTGGCATCCACCAGCAATCCTAACCAACCATTCCAACTCCAA
GAGCCAGAAACTCCAATAAACTTCCATCAACCTCAAAACCCAAACATCAGTCTATATCCC
AACCAAGCTGTTCCTCCACCCCAACAAACAGGTGCAAGGAATCAGTTTGATGCTGCAGCT
GTGAGAGGAAATATTTCAAATTCTCAGCAATTTCGACATCAATTGTCATGGAACACTCGT
CCTACCTTCTCATCTGCATTTCAGCAACTGTATGCCCCGTTCAATCCGACTTTGGTAGGA
ACGCAGAAAGTTACTTGTGCTAGTTTTTTCCCTTCAATGATCCCTGCTCTTTGCTGGAAC
AGGCAATCTTCAGCATTAAACTCTGCTCAAACAGTTGTTTTACCAAATCCAAAATTTGAC
TATACTTCTGTGTTGGCCAAACAGCTAGATAAAACAAATGAAATTCCACCAAGCAACCCT
TCTACCATGTTAGAACCACAGCTACCAACAATGCATTCTACACTGGTGCAATCCCCATCA
CAAAGCCATGATATAAAAGTCCAAGAGCCTTTAGTCCAACCACAATTCAGTGGAAGTAAT
TTAACCAACTGCACTTTCAACATTGCTGGAGGTGACATAAATACGTGCAATACAGGATTG
CAACCATCAAGTGCCATTGACCAATCTAATATGGGTGCCGTTGACCAATCCAATATAGAT
TTAGCCGCAGCTAAAGGCTGTTTGACAACTTCAGCTAAACAACAATGTTCATCGAAAAAC
ATTTTAAGAATAACCAAGCAGAAAATTGAGATTTGTCCAACAGAAATAACAGATAAACCA
AGTAGAATGCTTAAACCAGCAATATATGACACAATTCGTAAGCTTGAAAATCAGCATAGA
CCTTCATTGTACACTGATGATGATGATAATGGACATTACAACAGACGAAAAGAGTATGAG
AAAATTAATTTCAAAGAAAAGAGCAAAGTCTCCGTGGAAAGTCTTTTTCGTTTAGCTGCA
GAGCAAGCCAGTGAAAGTAATATTCCTGAATGCCAAGGAAATGTGGTTGCCCTGATTGGA
CAGCCAGGAATTGGAAAAACAACACTTTCCAAAGTTATCACTGAGAATATACTCCAGAAT
AAAATGGAAAACATAACAAATATTGATTGGGTTTTTTACATTTCTGTAAAAAAAATAGAT
TTTCAAAAACCTGTAACACTAGTTGATTTTCTGCTGAAACATTCAATGAATGTCACCCAA
TACAACAAGTTAAAAGGTAAAGGATGCTCTTCTTTGCAAGAAACAATACTTAAGGAGATT
TTAGAATCTAAAAATGTGTTCATTGCTTTTGATGGCCTTGATGAAGCTTCAACAGAATGG
GATTTAGAGTATAAAGGTGGTTTGAACTTGCGTGAAAAAAACAACCCCCTGCTTTACTTA
TACGGGCTTATGAATGGAGACATACTACCAGAAGCAAAAAAGCTTTTCACATCGCGGCAG
AATCATTATTTCTCTATTGACCAAAACTGTCGACCCCAATTTGTGGCCGAAGTTTTGGGT
TTAAACACAAAATCTCAAGAGAGTTTGTGTAAACAGATTTGCCCTGACCATCAAGATCAA
GTGTGGAAAATCACCGAAAGCAACCCAAACTTATCTTACTCATGTTATGTGCCAGCTAAA
TGTGTGTTTATTGTTTATGCAATTTGGAAAAGTCTTAAGGAGGATTCTAGTGAACGATTT
CACTCCCTTACTCACATTTTTGCGCAAGGATTTAAGTATTATTTTGCTGATGGATTTGTA
AAGGGAATTGTAAAAGATAAAAAATACATGGATAAAATTTCCAAATTGGCATGGAATGGA
TTTAAAATGAAAAAACTCATCTTTGAGGAAGAAGATTTAAATGAAGTGGGAATCGATACA
AAAACATTCATTGATATACTTTCAGCTTTTGTAGGAGAAGAAAATTGGGGGATGAAAATT
CTTGACTGTGACAGAAAAAGCAACTTTTCACATTTAATTTGGCAAGAGTATTTTGCTGCT
TGTTACCTTGTTTACTTCTCAAGTGTTGATGAGTTTTGTGAATTGATTCCTCAGTTTAAA
AGTGACAGATGGGAGGTAGTTACCAAGTTTGTTTTTGGTCTTTGCAACTCTGATGTCAAC
AAAGTTGCTAAGACTGGTTTTTGGACTAGAAAGCAAAACAAAGAGGAATTCCTGGCAAAA
AAATCAAAGTTATTTGAACTTGTTTGTGATGAGATGAAAGATCTTGGTGCCAAGCAGTTA
AATGCACATTTGCAGATCTTTTCATGGTTGCAAGAAATTAATGATGAGAAGTTTTATCAA
AAGGCTGTTCCTTATTTAAGTGACAGTTTTTCTTTAGACGGCACAATACTTTTAACTGAT
GTCTCCAGCATTTCAAAGTTAAGAAGATTTGATTTCAGCGAGAGAAACATCGATGACAAA
ACTGCATCTGCAATAGCTTTGTATGTTCACAATATTGAGGAACTGTCTATTAATCATTGT
AACGTTGCAGATGATGGAATTTGTCAAATTACTAAAGCTATTTTCTGTCTTTCACAGCCA
ATAAGATTATTAAGAGTTTGGCGAAACAAAGTCACTGATGAAATTGCAATTGCAATAGCT
TCCTGTATTCATAATATTGAGAAACTGGATCTGGAGAATTGTCAACTGACAAGTGTTGGA
ATTTGTATCATTGCGAAAGCCGTTTCAAGTCTTTTACAGCCAATGCAGGCATTAAATCTT
GGCATGAACAAACTGTGTGATCAAGATGCATCTTCAATTGCTTCCTGTATTTACAATATT
AAGGAGCTTTATCTCGACCATTGTCAACTGACTAGTGTTGGTATTAGTAATATTTCCAAT
GCCATTTCAAACTTTCAACAACCAATGCAAAAACTTGACCTATTTGGAAACAGAATTGAT
GAAGAAACAGCAAAAAGTTTGCTTGGTTGTCTGCATAACATAAAAGATGAACTGCGACTG
CGAAAATCTATTATAAGTAAAGAATTTGAATCAAATTATCTATTGGTACTGGAACCAAGT
CTTTCCCTTTCCACCTACTGTATGGGCAAGCTTTACCGAACAACATCAAATCTCTGGGGT
GGCACTAAATACCGCATGTGGCCGCATGTGACCGCATGTGATTCCTCTTAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[323-482] 9.81E-10
ProSiteProfiles
NACHT_NTPase (IPR007111) - T[374-519] 14.918
Pfam
NACHT_NTPase (IPR007111) - T[375-551] 1.7E-12
Gene3D
LRR_dom_sf (IPR032675) - T[762-1038] 1.9E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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