Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S162.g04506.01.t

Possible name(s)

VPS37B; VPS37C; VPS37D

Gene model

Phmamm.CG.MTP2014.S162.g04506

Location

S162 [87,883 / 88,825]

Sequences

Amino acid sequence

Length: 241

>Phmamm.CG.MTP2014.S162.g04506.01.p
MSQWSYQYPNPGQNVPKDEIDFTTLLEDASMEELQELMDNEDKINEIVMDNEKIKKLKLD
RELIQAENRSIADHNITREPKLKELREELALKYEQLKELNDNFNTNQAKLDSLHKDVNLE
TMLAVLQTTCAETEEQSEKLAEDFCEGELQLAEFMSTFKAKRTLAHMRRIKTDKMRELVL
DVQRNPPVSSTVSPPPVPGRIPNSQQNMYPYPSHFSPGPTQNRFPPNAYSSGNQQLPYKW
S

Nucleotide sequence

Length: 726

>Phmamm.CG.MTP2014.S162.g04506.01.t
ATGTCTCAGTGGAGTTACCAATACCCCAATCCTGGACAAAATGTACCTAAAGATGAAATT
GATTTTACGACACTTTTAGAAGATGCATCTATGGAAGAACTTCAGGAATTAATGGACAAT
GAGGATAAAATAAATGAAATTGTCATGGACAATGAGAAGATTAAAAAGCTTAAGTTGGAC
AGAGAATTGATTCAAGCTGAAAATAGAAGCATAGCAGACCACAACATTACTCGTGAACCC
AAATTAAAAGAACTGCGTGAGGAATTGGCACTAAAATATGAACAATTAAAGGAGCTGAAT
GATAATTTCAACACAAACCAGGCTAAATTAGATTCTTTGCACAAAGATGTTAATTTAGAA
ACAATGCTGGCAGTTTTACAAACCACATGTGCTGAAACCGAGGAACAGTCAGAGAAGTTG
GCAGAAGACTTCTGTGAGGGTGAACTTCAATTGGCAGAATTTATGTCAACTTTTAAGGCC
AAACGGACACTTGCACACATGCGCCGCATAAAAACCGATAAAATGCGAGAGTTGGTGTTG
GATGTTCAAAGAAATCCTCCTGTGTCATCAACTGTCTCTCCACCACCTGTTCCAGGCAGA
ATCCCTAACTCTCAACAAAACATGTACCCCTATCCTAGCCACTTTTCTCCAGGCCCAACA
CAGAATCGATTTCCACCAAATGCTTATTCATCTGGAAATCAACAACTCCCTTATAAATGG
TCTTGA

InterProScan

PANTHER	Vps37 (IPR037859) - T[1-218] 2.3E-66
Pfam	Mod_r (IPR009851) - T[28-171] 5.4E-35
ProSiteProfiles	Mod_r (IPR009851) - T[100-191] 22.243
SUPERFAMILY	ESCRT_assembly_dom (IPR037202) - T[122-172] 2.62E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VP37B_HUMAN	37.173 %	132	1.35E-37
VP37C_HUMAN	33.117 %	110	1.48E-28
VP37D_HUMAN	32.544 %	77.8	3.16E-17