- Transcript 'KH2012:KH.C11.291.v1...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R107...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S162.g04517.01.t
Possible name(s)
ZNF143; ZNF76; ZNF878
Gene model
Location
S162 [141,520 / 142,179]
Amino acid sequence
Length: 153
>Phmamm.CG.MTP2014.S162.g04517.01.p
VHKRTHTGEKPFVCKWDNCKKVFSTSYALKSHFRVHTGEKPYPCPQVQCKKAFKTSGDLQ
KHIRTHTGEKPFKCPFEGCGKAFTTSNICKVHIRTHTGERPHKCPYVECSKTFTNMTNYK
NHLRIHTGEKPYVCEVKNCGKQFTEYSSLYKHQ
Nucleotide sequence
Length: 459
>Phmamm.CG.MTP2014.S162.g04517.01.t
GTTCACAAAAGAACGCACACTGGGGAAAAACCATTTGTGTGCAAATGGGACAATTGTAAA
AAAGTCTTTTCGACAAGCTATGCATTGAAATCCCACTTTAGGGTACATACAGGTGAAAAG
CCTTATCCCTGCCCCCAAGTTCAGTGCAAGAAAGCTTTTAAGACCTCTGGAGATTTGCAA
AAACACATACGTACACACACAGGGGAAAAACCTTTTAAATGTCCTTTTGAGGGCTGTGGA
AAGGCTTTCACCACATCAAACATTTGTAAAGTTCACATTCGAACCCACACTGGCGAGCGC
CCCCACAAATGTCCTTATGTGGAGTGCTCAAAGACTTTTACAAACATGACAAATTACAAA
AATCATTTACGCATTCATACAGGAGAAAAACCATATGTTTGTGAAGTAAAAAATTGTGGA
AAGCAGTTTACAGAATATTCATCACTTTATAAGCATCAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[1-53] 2.72E-17 - T[52-113] 2.6E-20 - T[112-153] 1.56E-12 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[12-41] 15.189 - T[42-71] 16.186 - T[72-101] 15.147 - T[102-131] 15.646 - T[132-153] 10.97 |
| SMART |
Znf_C2H2_type (IPR013087) - T[12-36] 5.3E-4 - T[42-66] 7.5E-5 - T[72-96] 0.0016 - T[102-126] 0.0018 - T[132-153] 130.0 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[12-36] 4.9E-5 - T[42-66] 9.0E-7 - T[102-126] 5.1E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[14-36] . - T[44-66] . - T[74-96] . - T[104-126] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN143_HUMAN | 69.079 % | 235 | 3.75E-75 |
| ZNF76_HUMAN | 71.053 % | 245 | 9.86E-80 |
| ZN878_HUMAN | 48.876 % | 143 | 5.21E-41 |