- Transcript 'KH2012:KH.C1.1039.v1...' >
- Transcript 'KH2012:KH.C2.38.v1.A...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C10.73.v3....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S162.g04519.02.t
Possible name(s)
FBXW11; FBXW7; TRAF7
Gene model
Location
S162 [148,127 / 154,385]
Amino acid sequence
Length: 614
>Phmamm.CG.MTP2014.S162.g04519.02.p
MSGMEDLTIDARKQELLEARFWGASKPRLETTFGPLHSTVTTITTAEGEVEYEHDRTASM
SSYRSFSDSREDLCGGSRHGSLPRSLAHSDSLDFFKSRSRGSYSSSSTLSQPSSYHSNSS
EPQALVFVENVSAQLLCKICHKVYKDPIIMSCGHSFCRRCSKSVDACPVDNKKMKLVLPN
LTVSDQVGALFIHCRYGCRLSASHPGEYEVNPSGCPFTVKLSERKTHEESCQYAPISCPN
NPNCPIMLRLHLEEHLKLCKNIKCPNNKYGCSFVGDQESQVQHSANCKYEFVKGFLQVTD
EKIIKLHSAIKQRDEENNFLRSMLSKTAERVDDLEKSFEIKLDVLSNNQTKLVEELREFR
QDTVMINNQLQDLNTRLHMGNIGSFDPQQIFKCKGTFVGHTGPVWCLCVHGDYLFSGSSD
KQIKVWDTATNYKCQKTLEGHEGIVLALTAYGDKLFSGAADCTIKVWSIDTLEELASISA
HENPVCTLVCANNMLFSGSLKSIKIWDVLTLECKHVLQTSGGSVYSIAVTNHHIVCGTYE
NCIHVWDIRNHEPVAQLTGHVGIVYALAVLSTPEQTKVFSASYDRSLRGSVVALAVSRGR
VFSGGVDFTVKVWQ
Nucleotide sequence
Length: 1,845
>Phmamm.CG.MTP2014.S162.g04519.02.t
ATGTCTGGTATGGAGGATCTTACAATAGATGCTCGGAAGCAGGAATTGCTGGAAGCAAGG
TTTTGGGGTGCATCCAAGCCACGTTTGGAAACAACATTTGGACCATTGCACTCTACTGTT
ACAACTATTACGACAGCAGAGGGTGAAGTGGAATATGAGCATGATCGAACAGCCTCAATG
TCAAGCTACAGATCTTTTAGTGATAGTCGAGAAGATCTTTGTGGCGGAAGCAGACATGGC
AGTTTACCAAGAAGTCTTGCACACAGTGATTCATTAGACTTTTTTAAAAGTCGTTCACGG
GGATCATATTCATCATCTTCTACATTGTCGCAACCATCATCATACCATTCAAACTCTTCT
GAACCGCAGGCACTGGTTTTTGTTGAGAATGTTTCCGCTCAACTTTTGTGCAAAATTTGT
CATAAAGTGTATAAGGATCCAATCATAATGTCATGTGGCCATTCATTTTGTCGTCGCTGC
TCCAAATCTGTTGATGCTTGTCCAGTAGACAACAAAAAAATGAAACTTGTTTTACCAAAT
CTTACAGTCAGTGATCAAGTTGGCGCACTGTTCATCCACTGTCGATACGGTTGTAGATTA
AGTGCAAGTCACCCTGGTGAATATGAAGTAAACCCTTCAGGATGCCCATTCACTGTAAAA
CTCAGTGAAAGAAAAACACATGAAGAGTCTTGTCAATATGCCCCTATATCTTGCCCAAAC
AACCCAAACTGTCCAATCATGCTTCGCCTGCATCTAGAAGAGCATTTAAAGTTATGCAAA
AACATTAAATGTCCAAATAATAAATACGGGTGTTCATTTGTGGGGGATCAAGAGTCTCAA
GTACAACACTCTGCAAACTGTAAATATGAGTTTGTAAAGGGCTTTCTTCAGGTAACAGAT
GAAAAAATCATCAAGCTTCATTCTGCTATAAAACAAAGGGATGAGGAAAACAACTTTTTA
AGGTCGATGTTGTCTAAAACAGCAGAGAGAGTTGATGACTTGGAGAAGAGCTTTGAGATT
AAACTTGATGTTTTAAGTAACAACCAAACAAAGCTCGTTGAAGAATTACGGGAGTTTCGA
CAAGACACTGTTATGATCAATAACCAACTTCAAGACCTCAACACAAGACTGCACATGGGA
AATATTGGCTCCTTCGATCCTCAGCAAATATTCAAGTGCAAAGGTACATTTGTTGGACAT
ACTGGTCCTGTTTGGTGTCTGTGTGTTCATGGAGATTACTTGTTTAGTGGCTCATCTGAC
AAACAAATTAAGGTTTGGGACACAGCAACAAACTACAAATGTCAAAAAACTTTGGAAGGT
CATGAAGGCATTGTGCTGGCTTTAACAGCATATGGAGACAAGTTGTTCAGTGGAGCAGCA
GACTGCACTATAAAGGTCTGGTCCATTGACACCCTTGAAGAACTAGCATCTATATCTGCC
CATGAAAACCCAGTATGCACCCTTGTGTGTGCAAATAACATGCTCTTCAGTGGGTCTCTT
AAGTCAATCAAGATATGGGATGTACTTACACTGGAGTGTAAGCACGTCCTGCAGACGTCT
GGTGGAAGCGTTTACTCCATTGCTGTTACCAATCATCACATTGTCTGCGGAACTTATGAG
AATTGCATTCATGTTTGGGACATTCGTAACCACGAGCCGGTCGCCCAGCTTACGGGGCAT
GTCGGTATTGTTTACGCTCTTGCCGTTTTAAGCACACCAGAACAAACAAAGGTATTCAGC
GCCTCCTATGATCGATCCTTGCGGGGCAGCGTTGTAGCTTTAGCGGTTTCGCGGGGTCGT
GTGTTTTCGGGTGGAGTTGATTTTACCGTAAAAGTGTGGCAATGA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[93-193] 4.5E-11 - T[209-256] 1.1E-7 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[137-171] 11.648 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[137-161] 4.7E-7 |
| SMART |
Znf_RING (IPR001841) - T[137-170] 4.5E-6 |
| SUPERFAMILY |
TRAF-like (IPR008974) - T[189-257] 3.86E-9 - T[251-299] 2.81E-5 |
| ProSiteProfiles |
Znf_TRAF (IPR001293) - T[226-297] 10.172 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[370-614] 6.4E-54 |
| SMART |
WD40_repeat (IPR001680) - T[390-427] 6.0E-10 - T[431-468] 5.7E-5 - T[471-507] 0.043 - T[510-547] 0.034 - T[550-614] 0.46 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[391-614] 5.5E-56 |
| Pfam |
WD40_repeat (IPR001680) - T[392-427] 7.0E-7 - T[433-468] 1.3E-4 - T[553-613] 0.2 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[397-588] 29.161 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[397-436] 11.578 - T[438-477] 11.11 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[414-428] 5.4E-6 - T[455-469] 5.4E-6 - T[601-614] 5.4E-6 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[414-428] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 29.707 % | 107 | 2.7E-24 |
| FBW1B_HUMAN | 27.547 % | 84.7 | 3.82E-17 |
| TRAF7_HUMAN | 55.093 % | 696 | 0 |