- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1645.g15325.01.t
Possible name(s)
TBX20; TBX4; TBX6
Gene model
Location
S1645 [766 / 3,452]
Amino acid sequence
Length: 435
>Phmamm.CG.MTP2014.S1645.g15325.01.p
MISGYRHMVYDKKYSQVVRSPYEENVQVDLQDLEVWDKFSAAKTEMIVTKPGRRIFPGYR
VKFSGLDPNAHYCVLMDVVNVDEHRYKFQNGQWVVSGRGEPKIPQKFYVHPKSPFTGGKL
MNQVLSFHTVKLTNSFAHSAAEKFNVHSMHRYQLRVHIVRTYDVATIKHEPMSTFSFPQT
TFFTVTAYPNHEITKLKIANNPFARAFRCDGGKTKNARRFTDVVEHPHCDIMQTNKRLKV
AVPSNTTPIAAAHTGYSNFQPNISPQTTNFPATYIASHTMSDQYSSSYPYSSSANVIQPG
YFPVYKEEQLGYDVNCISPYSNTEQYSPQFTQNSPPFTQQTTHQFSFPSPTFSQHSPQQF
QSFKNVEETNFVFPPPSQLFTDQQFSNNFDNINTNYLGSDIISPVSIDDYICVSPLYVPE
SSSPSYETFPNTCSY
Nucleotide sequence
Length: 1,308
>Phmamm.CG.MTP2014.S1645.g15325.01.t
ATGATTTCCGGATATCGCCATATGGTTTATGACAAAAAATATTCACAAGTGGTTCGATCT
CCATATGAAGAGAATGTTCAAGTTGATCTTCAGGATCTTGAAGTTTGGGACAAATTTTCA
GCTGCAAAAACCGAGATGATTGTCACCAAACCTGGAAGACGAATCTTTCCTGGTTACCGA
GTGAAGTTCTCAGGTTTGGACCCGAACGCGCATTATTGTGTCTTGATGGATGTTGTTAAT
GTTGACGAACACAGATACAAGTTTCAGAACGGCCAATGGGTTGTGTCTGGTCGAGGTGAA
CCTAAAATTCCCCAGAAGTTTTATGTTCACCCTAAATCCCCGTTCACTGGAGGAAAATTG
ATGAACCAAGTTCTATCTTTTCACACAGTAAAGCTCACAAACTCATTTGCACATTCAGCT
GCGGAAAAGTTCAACGTCCACTCAATGCATCGTTATCAATTGCGCGTTCACATTGTTCGT
ACTTACGACGTTGCAACGATCAAGCATGAACCGATGTCAACATTTTCATTTCCACAAACC
ACTTTCTTCACAGTGACGGCGTATCCGAATCATGAGATAACGAAACTAAAAATCGCTAAC
AATCCCTTTGCTCGAGCATTTCGATGCGATGGTGGAAAAACGAAAAACGCCAGACGTTTT
ACTGATGTTGTGGAACATCCCCATTGTGACATCATGCAGACAAACAAACGATTGAAAGTA
GCCGTTCCTTCCAACACAACCCCTATTGCTGCAGCACACACTGGGTATTCAAATTTTCAA
CCGAATATCTCTCCACAAACGACCAACTTTCCCGCTACTTACATCGCCTCCCACACGATG
TCGGATCAATACTCTTCATCTTATCCTTATTCCTCATCAGCGAACGTTATTCAGCCTGGA
TATTTTCCAGTTTACAAAGAAGAACAGTTGGGTTATGATGTGAACTGTATATCGCCATAC
AGCAATACTGAACAATATTCGCCGCAGTTTACACAAAATTCACCCCCTTTCACCCAGCAA
ACAACCCATCAGTTTTCCTTCCCATCACCCACTTTTTCCCAGCATTCGCCTCAGCAGTTT
CAATCATTTAAAAACGTTGAAGAAACCAATTTTGTTTTTCCGCCACCGTCCCAGCTATTC
ACGGATCAACAATTTTCAAATAATTTTGATAATATAAATACGAATTATTTGGGCTCAGAC
ATTATTTCTCCAGTGTCTATCGATGACTATATTTGTGTTTCGCCGTTATATGTACCTGAG
TCTTCTTCGCCTAGTTATGAGACATTTCCCAACACTTGCAGTTATTAA
| PANTHER |
TF_T-box (IPR001699) - T[15-278] 1.4E-97 |
| Gene3D |
T-box_sf (IPR036960) - T[22-215] 4.6E-74 |
| SMART |
TF_T-box (IPR001699) - T[25-213] 2.4E-90 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[25-208] 6.34E-64 |
| CDD |
TF_T-box (IPR001699) - T[25-211] 1.13357E-90 |
| Pfam |
TF_T-box (IPR001699) - T[28-208] 4.2E-69 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[30-209] 62.438 |
| PRINTS |
TF_T-box (IPR001699) - T[43-67] 1.4E-30 - T[108-121] 1.4E-30 - T[125-134] 1.4E-30 - T[145-159] 1.4E-30 - T[180-193] 1.4E-30 - T[201-209] 1.4E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 47.739 % | 202 | 2.72E-60 |
| TBX4_HUMAN | 40.891 % | 196 | 4.3E-57 |
| TBX20_HUMAN | 46.919 % | 194 | 3.18E-57 |