Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S167.g04608.02.t

Possible name(s)

RPL6

Gene model

Phmamm.CG.MTP2014.S167.g04608

Location

S167 [125,973 / 127,204]

Sequences

Amino acid sequence

Length: 153

>Phmamm.CG.MTP2014.S167.g04608.02.p
MQQPHAPRNKPLGGGINRYSRSVMYAKRFAFKKRKNITMIEKKRAERMSEKPIGGDKNGG
TRLVRVKKMPRYYPTEELPRKLKSHGKKPFSQHKRKLRSTITPGTVLILLAGPYRGKRVV
FLKQLDTGGGGELRQELCLSFLLVPTVESELFS

Nucleotide sequence

Length: 462

>Phmamm.CG.MTP2014.S167.g04608.02.t
ATGCAGCAACCTCACGCGCCGAGGAACAAACCCCTCGGTGGTGGCATTAATCGTTACTCG
CGCTCTGTGATGTACGCCAAGCGATTTGCTTTCAAAAAACGAAAGAACATCACCATGATT
GAAAAAAAGAGAGCAGAGAGGATGTCTGAAAAGCCCATCGGAGGAGACAAAAATGGAGGA
ACTCGTCTTGTTCGAGTCAAGAAGATGCCACGTTACTACCCCACTGAGGAACTTCCCAGA
AAATTGAAGTCACATGGCAAGAAACCATTTAGCCAACACAAGCGCAAACTGAGGTCGACT
ATTACGCCGGGAACTGTGCTTATCCTTCTTGCTGGCCCCTACCGTGGAAAGCGAGTTGTT
TTCTTGAAGCAATTAGACACTGGAGGGGGGGGGGAATTACGCCAGGAACTGTGCTTATCC
TTCTTGCTGGTCCCTACCGTGGAAAGCGAGTTGTTTTCTTGA

InterProScan

PANTHER	60S_ribosomal_L6E (IPR000915) - T[2-128] 3.0E-43
Pfam	Ribosomal_L6_N (IPR005568) - T[2-44] 1.1E-9
SUPERFAMILY	Translation_prot_SH3-like_sf (IPR008991) - T[99-128] 4.21E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL6_HUMAN	57.364 %	148	4.9E-45