- Transcript 'KH2012:KH.C7.190.v2....' >
- Transcript 'KH2012:KH.C3.466.v1....' >
- Clone 'cima889765' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S16.g00683.01.t
Possible name(s)
CDC6; ORC1
Gene model
Location
S16 [220,070 / 224,065]
Amino acid sequence
Length: 661
>Phmamm.CG.MTP2014.S16.g00683.01.p
MAFRTRSGKLYGTPDVALAKKCLGVSKAALTKSASKRLNLLGQQLPELEGHSLIDDNVLD
EIFKLSPVSPVKRCKENIKPSVSNCRILLSPLRSLTLNSPRSKKVEAAQSAFVKNRLNLA
LSGSTIPTSGYCTQLQKSPTKLPLGDVSNTLNFSSPQKDNSSSPKKQVSPKRSLDASLKT
ASPSPTKKQKINKLKTLEVPSRKTDGSEKCSSPRKKEVSDSKQSARKVLIETQHHNVPVK
EIKVNVKSPIKHGHKDSSFSKIKHALHNAAPATLVGRESEISEITNFISDHANNRTAGSL
YISGAPGTGKSACMMNILSQTKVKAMVGQIINVNCMSIRSAASIYQCIASQLGALSRQSK
TSRSALKYIENHLTSSGEMILLFLDEMDQLDSKHQEVLYTMFGWSSLKNSRMILIGIANS
LDLTDRILPRLQARSDCKPNLMNFQPYTKDQLVKILQARVQQAKNKNNLSDPSLIDPMAI
QFCARKVAAMTGDARKALDVCRRAVEVVETSRNKSTDTNSSVPQKVGLQQISNIMQGVYD
SSNLCQQKTSCEQDNDDTFPLQQKLVVCTLFLLCKTSKCKEVPMGKLHESYTTICKKRQV
PAVGQSEFVSLCELVESRGILSTRKAKQVRQSKVKLNMQEKDVEFALKGKALLSSILQLG
L
Nucleotide sequence
Length: 1,986
>Phmamm.CG.MTP2014.S16.g00683.01.t
ATGGCATTTCGAACCAGAAGCGGAAAACTATATGGAACCCCTGATGTTGCTTTGGCCAAG
AAATGCCTTGGGGTTTCAAAAGCAGCATTAACGAAGTCGGCAAGCAAGCGTCTAAACCTA
CTTGGCCAACAGCTGCCTGAACTAGAAGGACATTCCCTAATTGATGACAATGTCCTTGAT
GAAATTTTTAAGCTATCACCGGTGTCGCCTGTTAAGCGATGCAAGGAAAATATTAAACCA
AGTGTCTCGAACTGCAGAATTTTGCTTTCACCTTTGCGCTCGCTGACTCTAAATTCACCA
AGGAGCAAAAAAGTAGAGGCTGCTCAAAGTGCGTTTGTTAAAAATCGTTTGAATCTTGCG
CTCTCTGGGTCGACTATTCCAACATCGGGTTACTGTACGCAATTACAGAAGTCCCCAACT
AAACTACCACTGGGAGATGTTTCCAACACTTTAAATTTTAGTTCACCACAAAAAGATAAC
TCTTCATCTCCAAAGAAGCAAGTTTCACCCAAAAGATCTTTGGATGCTAGCCTCAAAACT
GCATCTCCATCACCAACTAAGAAACAGAAGATTAATAAGTTAAAAACTCTAGAAGTGCCA
TCCAGAAAAACAGATGGCAGTGAAAAATGTTCTAGCCCAAGAAAAAAAGAAGTTTCAGAT
TCAAAACAATCTGCTCGTAAGGTTCTTATTGAAACTCAACATCATAACGTTCCTGTCAAA
GAGATCAAAGTCAATGTGAAATCACCAATTAAGCATGGACACAAAGATTCTTCCTTCTCC
AAGATAAAGCATGCACTGCATAATGCTGCCCCTGCAACGCTTGTTGGGCGTGAAAGTGAA
ATTAGTGAAATAACCAACTTCATTTCGGATCATGCTAACAATCGAACCGCTGGCAGTTTG
TATATTTCTGGTGCCCCAGGAACTGGAAAAAGCGCTTGCATGATGAACATTTTATCGCAA
ACGAAGGTAAAAGCAATGGTTGGACAAATCATTAACGTCAATTGCATGTCCATTCGGTCA
GCTGCTTCCATTTATCAGTGCATTGCTTCACAACTTGGTGCTTTAAGTCGGCAATCGAAG
ACCTCCAGATCTGCTCTGAAATACATTGAAAATCATTTGACATCTTCGGGTGAAATGATA
CTTTTGTTTCTGGATGAGATGGACCAGCTAGATAGCAAACACCAGGAAGTGTTGTACACG
ATGTTTGGATGGTCAAGTCTCAAAAACTCTCGCATGATTTTGATCGGAATTGCAAACTCT
CTTGACTTGACAGACAGAATACTGCCCAGGCTTCAAGCTCGCTCGGATTGCAAACCTAAC
CTTATGAACTTTCAACCGTACACAAAAGACCAACTTGTCAAGATTTTGCAAGCCAGAGTA
CAACAGGCTAAAAATAAAAACAATCTGTCAGATCCAAGTCTCATCGATCCAATGGCAATT
CAATTTTGTGCAAGGAAAGTTGCAGCCATGACTGGAGACGCACGAAAAGCTTTAGATGTT
TGTCGCAGGGCTGTAGAAGTGGTGGAAACATCAAGAAACAAATCAACAGACACTAACAGT
TCTGTCCCTCAAAAAGTTGGATTGCAACAAATCTCCAACATTATGCAAGGTGTCTACGAT
TCAAGCAACCTTTGTCAGCAAAAAACCTCCTGCGAACAAGACAATGACGACACTTTTCCA
TTACAACAAAAGCTGGTTGTATGTACATTATTCCTGCTATGCAAGACCTCCAAGTGCAAA
GAAGTCCCAATGGGAAAGCTGCATGAATCCTACACAACAATATGCAAAAAGCGACAAGTT
CCTGCAGTCGGACAATCAGAGTTTGTGTCACTTTGTGAATTGGTTGAGTCAAGAGGAATT
CTTAGTACGCGCAAAGCTAAGCAAGTTAGACAATCAAAGGTGAAACTAAATATGCAAGAA
AAGGATGTGGAATTTGCACTGAAGGGGAAAGCTCTTCTCTCATCCATTTTGCAGTTGGGC
CTCTAA
| PIRSF |
Cdc6/18 (IPR016314) - T[127-661] 2.5E-140 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[271-512] 1.08E-38 |
| Pfam |
AAA+_ATPase (IPR003593) - T[295-418] 1.6E-12 |
| SMART |
AAA+_ATPase (IPR003593) - T[296-434] 0.008 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[557-656] 5.62E-19 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[559-657] 6.9E-15 |
| CDD |
Cdc6_C (IPR015163) - T[560-643] 3.23928E-17 |
| SMART |
Cdc6_C (IPR015163) - T[567-647] 2.3E-16 |
| Pfam |
Cdc6_C (IPR015163) - T[568-646] 1.8E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC6_HUMAN | 46.062 % | 376 | 5.94E-123 |
| ORC1_HUMAN | 30.905 % | 161 | 2.28E-41 |