- Clone 'cilv032n04' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S16.g00683.02.t
Possible name(s)
CDC6; ORC1
Gene model
Location
S16 [220,137 / 224,083]
Amino acid sequence
Length: 639
>Phmamm.CG.MTP2014.S16.g00683.02.p
MAFRTRSGKLYGTPDVALAKKCLGVSKAALTKSASKRLNLLGQQLPELEGHSLIDDNVLD
EIFKLSPVSPVKRCKENIKPSVSNCRILLSPLRSLTLNSPRSKKVEAAQSAFVKNRLNLA
LSGSTIPTSGYCTQLQKSPTKLPLGDVSNTLNFSSPQKDNSSSPKKQVSPKRSLDASLKT
ASPSPTKKQKINKLKTLEVPSRKTDGSEKCSSPRKKEVSDSKQSARKVLIETQHHNVPVK
EIKVNVKSPIKHGHKDSSFSKIKHALHNAAPATLVGRESEISEITNFISDHANNRTAGSL
YISGAPGTGKSACMMNILSQTKVKAMVGQIINVNCMSIRSAASIYQCIASQLGALSRQSK
TSRSALKYIENHLTSSGEMILLFLDEMDQLDSKHQEVLYTMFGWSSLKNSRMILIGIANS
LDLTDRILPRLQARSDCKPNLMNFQPYTKDQLVKILQARVQQAKNKNNLSDPSLIDPMAI
QFCARKVAAMTGDARKALDVCRRAVEVVETSRNKSTDTNSSVPQKVGLQQISNIMQGVYD
SSNLCQQKTSCEQDNDDTFPLQQKLVVCTLFLLCKTSKCKEVPMGKLHESYTTICKKRQV
PAVGQSEFVSLCELVESRGILSTRKAKQVRQSKVKLNMQ
Nucleotide sequence
Length: 1,937
>Phmamm.CG.MTP2014.S16.g00683.02.t
TTTTAAGTTTAGCCAAAAATGGCATTTCGAACCAGAAGCGGAAAACTATATGGAACCCCT
GATGTTGCTTTGGCCAAGAAATGCCTTGGGGTTTCAAAAGCAGCATTAACGAAGTCGGCA
AGCAAGCGTCTAAACCTACTTGGCCAACAGCTGCCTGAACTAGAAGGACATTCCCTAATT
GATGACAATGTCCTTGATGAAATTTTTAAGCTATCACCGGTGTCGCCTGTTAAGCGATGC
AAGGAAAATATTAAACCAAGTGTCTCGAACTGCAGAATTTTGCTTTCACCTTTGCGCTCG
CTGACTCTAAATTCACCAAGGAGCAAAAAAGTAGAGGCTGCTCAAAGTGCGTTTGTTAAA
AATCGTTTGAATCTTGCGCTCTCTGGGTCGACTATTCCAACATCGGGTTACTGTACGCAA
TTACAGAAGTCCCCAACTAAACTACCACTGGGAGATGTTTCCAACACTTTAAATTTTAGT
TCACCACAAAAAGATAACTCTTCATCTCCAAAGAAGCAAGTTTCACCCAAAAGATCTTTG
GATGCTAGCCTCAAAACTGCATCTCCATCACCAACTAAGAAACAGAAGATTAATAAGTTA
AAAACTCTAGAAGTGCCATCCAGAAAAACAGATGGCAGTGAAAAATGTTCTAGCCCAAGA
AAAAAAGAAGTTTCAGATTCAAAACAATCTGCTCGTAAGGTTCTTATTGAAACTCAACAT
CATAACGTTCCTGTCAAAGAGATCAAAGTCAATGTGAAATCACCAATTAAGCATGGACAC
AAAGATTCTTCCTTCTCCAAGATAAAGCATGCACTGCATAATGCTGCCCCTGCAACGCTT
GTTGGGCGTGAAAGTGAAATTAGTGAAATAACCAACTTCATTTCGGATCATGCTAACAAT
CGAACCGCTGGCAGTTTGTATATTTCTGGTGCCCCAGGAACTGGAAAAAGCGCTTGCATG
ATGAACATTTTATCGCAAACGAAGGTAAAAGCAATGGTTGGACAAATCATTAACGTCAAT
TGCATGTCCATTCGGTCAGCTGCTTCCATTTATCAGTGCATTGCTTCACAACTTGGTGCT
TTAAGTCGGCAATCGAAGACCTCCAGATCTGCTCTGAAATACATTGAAAATCATTTGACA
TCTTCGGGTGAAATGATACTTTTGTTTCTGGATGAGATGGACCAGCTAGATAGCAAACAC
CAGGAAGTGTTGTACACGATGTTTGGATGGTCAAGTCTCAAAAACTCTCGCATGATTTTG
ATCGGAATTGCAAACTCTCTTGACTTGACAGACAGAATACTGCCCAGGCTTCAAGCTCGC
TCGGATTGCAAACCTAACCTTATGAACTTTCAACCGTACACAAAAGACCAACTTGTCAAG
ATTTTGCAAGCCAGAGTACAACAGGCTAAAAATAAAAACAATCTGTCAGATCCAAGTCTC
ATCGATCCAATGGCAATTCAATTTTGTGCAAGGAAAGTTGCAGCCATGACTGGAGACGCA
CGAAAAGCTTTAGATGTTTGTCGCAGGGCTGTAGAAGTGGTGGAAACATCAAGAAACAAA
TCAACAGACACTAACAGTTCTGTCCCTCAAAAAGTTGGATTGCAACAAATCTCCAACATT
ATGCAAGGTGTCTACGATTCAAGCAACCTTTGTCAGCAAAAAACCTCCTGCGAACAAGAC
AATGACGACACTTTTCCATTACAACAAAAGCTGGTTGTATGTACATTATTCCTGCTATGC
AAGACCTCCAAGTGCAAAGAAGTCCCAATGGGAAAGCTGCATGAATCCTACACAACAATA
TGCAAAAAGCGACAAGTTCCTGCAGTCGGACAATCAGAGTTTGTGTCACTTTGTGAATTG
GTTGAGTCAAGAGGAATTCTTAGTACGCGCAAAGCTAAGCAAGTTAGACAATCAAAGGTG
AAACTAAATATGCAAGA
| PIRSF |
Cdc6/18 (IPR016314) - T[127-639] 1.9E-133 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[271-512] 9.94E-39 |
| Pfam |
AAA+_ATPase (IPR003593) - T[295-418] 1.5E-12 |
| SMART |
AAA+_ATPase (IPR003593) - T[296-434] 0.008 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[557-635] 7.62E-16 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[559-638] 1.2E-12 |
| CDD |
Cdc6_C (IPR015163) - T[560-638] 4.73356E-16 |
| SMART |
Cdc6_C (IPR015163) - T[567-638] 8.0E-8 |
| Pfam |
Cdc6_C (IPR015163) - T[568-638] 1.2E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC6_HUMAN | 45.34 % | 352 | 4.14E-114 |
| ORC1_HUMAN | 30.57 % | 152 | 1.44E-38 |