- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S170.g04651.01.t
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
S170 [19,514 / 32,937]
Amino acid sequence
Length: 594
>Phmamm.CG.MTP2014.S170.g04651.01.p
GSASPQHMEVANVPRDDSSNDEEMDDNISSTLDLQGVPVSIAVDHNESSLSAPNISHPMQ
HQPVTVSVISPSSQALRDMNTLNSMPYGEGTIHDDDFNPLQTVFPSNKHRKSQEALSDSY
KTERDACTKHFDTWSEHEQVDYVEHLILRMCHYQHGQVNSFLKPMLQRDFITALPGRGLS
HIAENILTYLDAKSLGAAELVCREWYRVIQDGHLWKRLIERNVSTDSLWKGLAERMGWSQ
YLFKGKPNEDVPDSFFRSLYPSIINDIEKIESNWRCGRHDLKRIMCRSDNSKGVYCLQYD
DQKIVSGLRDNTIKLWDRKTLDNTKVLTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNT
GEMVNTLVHHCEAVLHLRFDAGLMVTCSKDRSIAVWDMVSPKEINMRRVLVGHRAAVNVV
DFDDKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD
IEFGACLRILEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRSPSSTLCLRTLV
EHTGRVFRLQFDEFQIVSSSHDDSILIWDFLTVPEPNPPSTSKSPNRTYTYVPR
Nucleotide sequence
Length: 2,499
>Phmamm.CG.MTP2014.S170.g04651.01.t
GGGATCTGCATCTCCACAACATATGGAGGTAGCGAATGTTCCCAGAGATGATTCATCTAA
TGATGAAGAAATGGACGATAACATTTCTTCTACCCTCGATTTACAAGGTGTCCCTGTTTC
CATCGCCGTTGACCACAATGAATCGTCCCTCTCTGCGCCAAACATTTCCCACCCCATGCA
ACATCAGCCAGTCACTGTGTCTGTTATCTCACCTTCCTCCCAGGCTCTGCGGGATATGAA
CACATTAAACAGCATGCCTTATGGAGAGGGCACCATACATGACGATGACTTCAACCCCTT
ACAAACAGTTTTTCCATCGAACAAGCATCGAAAAAGCCAAGAAGCCTTAAGTGATAGTTA
CAAAACAGAAAGAGATGCCTGCACGAAACACTTTGACACCTGGTCTGAACATGAACAGGT
TGATTATGTTGAACACTTGATTTTACGCATGTGCCATTACCAACATGGCCAAGTGAACTC
GTTTTTAAAGCCAATGTTGCAGCGTGATTTTATTACTGCATTACCTGGTCGCGGTTTATC
TCATATTGCTGAAAACATACTGACTTATCTTGATGCCAAATCATTGGGCGCTGCCGAACT
TGTCTGTCGAGAGTGGTACCGAGTAATTCAGGATGGCCACCTATGGAAGCGACTTATTGA
AAGAAATGTTTCAACCGATTCGTTATGGAAAGGCCTTGCTGAGAGAATGGGATGGAGTCA
ATACCTGTTTAAAGGAAAACCAAATGAAGATGTTCCAGATTCCTTTTTTAGAAGCCTCTA
CCCATCCATAATAAATGACATAGAGAAAATTGAATCCAACTGGAGGTGTGGAAGACATGA
CCTAAAGAGAATAATGTGCCGAAGCGATAACAGCAAAGGAGTTTATTGCTTGCAGTATGA
TGACCAGAAGATAGTGTCTGGATTACGAGACAACACAATCAAATTGTGGGACCGCAAAAC
CCTGGATAACACCAAGGTGCTAACCGGTCATACGGGATCAGTGCTGTGTCTGCAATATGA
CGAGCGGGTGATCATTACTGGATCATCTGATTCCACAGTCAGAGTCTGGGACGTGAACAC
AGGGGAAATGGTGAATACCCTGGTGCATCATTGCGAAGCCGTGCTGCATCTGCGTTTTGA
CGCCGGACTTATGGTCACTTGCTCCAAGGATCGCTCCATTGCCGTGTGGGACATGGTTTC
GCCCAAGGAGATCAACATGCGACGTGTGCTGGTCGGCCATCGTGCAGCTGTCAACGTGGT
AGACTTCGACGACAAGTACATTGTTTCGGCGTCCGGTGATCGCACCATCAAGGTCTGGAA
TACCTCTTCATGCGAATTTGTGCGGACACTGAACGGTCACAAGCGGGGAATCGCCTGCCT
TCAATACCGGGATCGCCTGGTCGTCAGCGGCTCTTCGGACAACACAATAAGATTGTGGGA
CATCGAGTTCGGCGCCTGCCTTCGCATACTGGAAGGACACGAAGAACTTGTGCGGTGTAT
TCGATTCGACAACAAACGCATTGTGAGCGGAGCTTATGATGGGAAAATCAAGGTGTGGGA
TTTGCAAGCAGCCTTAGACCCGCGATCTCCTTCTAGCACCCTCTGCCTACGAACCCTCGT
GGAACACACTGGACGAGTTTTCCGACTTCAGTTCGACGAGTTTCAGATTGTCAGCAGTTC
GCATGACGATTCCATTCTTATTTGGGATTTCCTTACTGTTCCCGAACCTAACCCACCCAG
CACATCAAAATCACCAAATCGGACTTACACGTACGTTCCACGATGATAGAGCGACCACAT
CATCACCTCCACCTTTTTGGCCCGTAGCAAAATCGCCTTCCTCACACTGCTGTATACAAT
CGCTCAAACAGCTCACTACAAATCTTCTGGACACAGCAGAAGTCAGGACAAAAAATCTGC
CATTAGCCCAATGACATTTCGCAATTATTTCGCCTGTCAAAAACGCAAAAGCCTTCGACT
CTTTCTGTGTGTTTTCCTCAAGTGACCACGACGACTCTTCTAGTCTCTCCTTTACACCTT
TTTTCAGCTTGCTTCGTCGAGACTCGCCCCCTATTTCCTCCTTCGCTGATTTAGATATAT
ACTAACGGTGTGTGCGTGCGTTATTTCCTTTCGTTAACTTGATGTGTTTCCTTTTGGTCG
CGGCGCTATAGGGCGGCATGAAACTCTCCCATTGGTTCGAATCGCCTTCGCTGCCCACCC
TAGGCGTGTCTTTCTAACTATTACTACTATTAATATGCGTTATTGTTTAGCCTTGTACTG
CAAAATGATCTTTTGCTTTTGCGCAAGGCTCACGACTTGGGGCCACAACGAAACGGAATC
CGGCCGTGGTTGACCCATGCTGCGGCGATCCTTGTATGAAATGAAACCTAATTTTTGTTG
TTCCTTTTTCGTTTTTGCTGTTTTTAAGAGCGCGAGCCCCCGCGTTCATTTATGTCTACT
GTACAACCGTTAAAAACAAATAAACTGTGGCTGAAGCCC
| SMART |
Beta-TrCP_D (IPR021977) - T[128-167] 3.2E-25 |
| Pfam |
Beta-TrCP_D (IPR021977) - T[129-167] 3.9E-23 |
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[163-275] 9.81E-25 |
| SMART |
F-box_dom (IPR001810) - T[179-218] 4.4E-5 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[180-218] 9.365 |
| Pfam |
F-box_dom (IPR001810) - T[182-218] 8.3E-9 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[274-568] 1.1E-106 |
| SMART |
WD40_repeat (IPR001680) - T[280-317] 0.048 - T[320-357] 5.6E-7 - T[360-397] 2.1E-4 - T[403-440] 3.7E-6 - T[443-480] 1.1E-6 - T[483-520] 2.1E-6 - T[532-569] 3.8E-4 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[282-570] 6.41E-75 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[287-326] 9.038 - T[327-366] 16.223 - T[367-406] 9.807 - T[410-449] 13.449 - T[450-489] 13.75 - T[490-529] 13.148 - T[539-569] 9.573 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[287-578] 59.743 |
| Pfam |
WD40_repeat (IPR001680) - T[292-317] 0.066 - T[323-357] 1.1E-5 - T[408-440] 7.8E-4 - T[446-480] 5.4E-5 - T[484-520] 6.3E-6 - T[535-569] 0.1 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[344-358] 5.0E-10 - T[467-481] 5.0E-10 - T[507-521] 5.0E-10 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[344-358] . - T[384-398] . - T[427-441] . - T[467-481] . - T[507-521] . - T[556-570] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 31.544 % | 225 | 5.05E-65 |
| FBW1A_HUMAN | 80.658 % | 831 | 0 |
| FBW1B_HUMAN | 80.462 % | 822 | 0 |