- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S170.g04651.02.t
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
S170 [20,629 / 33,288]
Amino acid sequence
Length: 601
>Phmamm.CG.MTP2014.S170.g04651.02.p
MDSDPDDCLFEDLGENRMGSASPQHMEVANVPRDDSSNDEEMDDNISSTLDLQGVPVSIA
VDHNESSLSAPNISHPMQHQPVTVSVISPSSQALRDMNTLNSMPYGEGTIHDDDFNPLQT
VFPSNKHRKSQEALSDSYKTERDACTKHFDTWSEHEQVDYVEHLILRMCHYQHGQVNSFL
KPMLQRDFITALPGRGLSHIAENILTYLDAKSLGAAELVCREWYRVIQDGHLWKRLIERN
VSTDSLWKGLAERMGWSQYLFKGKPNEDVPDSFFRSLYPSIINDIEKIESNWRCGRHDLK
RIMCRSDNSKGVYCLQYDDQKIVSGLRDNTIKLWDRKTLDNTKVLTGHTGSVLCLQYDER
VIITGSSDSTVRVWDVNTGEMVNTLVHHCEAVLHLRFDAGLMVTCSKDRSIAVWDMVSPK
EINMRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY
RDRLVVSGSSDNTIRLWDIEFGACLRILEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ
AALDPRSPSSTLCLRTLVEHTGRVFRLQFDEFQIVSSSHDDSILIWDFLTVPEPNPPSTS
K
Nucleotide sequence
Length: 1,806
>Phmamm.CG.MTP2014.S170.g04651.02.t
ATGGACAGCGATCCAGATGATTGCTTGTTTGAAGATCTTGGGGAAAATCGTATGGGATCT
GCATCTCCACAACATATGGAGGTAGCGAATGTTCCCAGAGATGATTCATCTAATGATGAA
GAAATGGACGATAACATTTCTTCTACCCTCGATTTACAAGGTGTCCCTGTTTCCATCGCC
GTTGACCACAATGAATCGTCCCTCTCTGCGCCAAACATTTCCCACCCCATGCAACATCAG
CCAGTCACTGTGTCTGTTATCTCACCTTCCTCCCAGGCTCTGCGGGATATGAACACATTA
AACAGCATGCCTTATGGAGAGGGCACCATACATGACGATGACTTCAACCCCTTACAAACA
GTTTTTCCATCGAACAAGCATCGAAAAAGCCAAGAAGCCTTAAGTGATAGTTACAAAACA
GAAAGAGATGCCTGCACGAAACACTTTGACACCTGGTCTGAACATGAACAGGTTGATTAT
GTTGAACACTTGATTTTACGCATGTGCCATTACCAACATGGCCAAGTGAACTCGTTTTTA
AAGCCAATGTTGCAGCGTGATTTTATTACTGCATTACCTGGTCGCGGTTTATCTCATATT
GCTGAAAACATACTGACTTATCTTGATGCCAAATCATTGGGCGCTGCCGAACTTGTCTGT
CGAGAGTGGTACCGAGTAATTCAGGATGGCCACCTATGGAAGCGACTTATTGAAAGAAAT
GTTTCAACCGATTCGTTATGGAAAGGCCTTGCTGAGAGAATGGGATGGAGTCAATACCTG
TTTAAAGGAAAACCAAATGAAGATGTTCCAGATTCCTTTTTTAGAAGCCTCTACCCATCC
ATAATAAATGACATAGAGAAAATTGAATCCAACTGGAGGTGTGGAAGACATGACCTAAAG
AGAATAATGTGCCGAAGCGATAACAGCAAAGGAGTTTATTGCTTGCAGTATGATGACCAG
AAGATAGTGTCTGGATTACGAGACAACACAATCAAATTGTGGGACCGCAAAACCCTGGAT
AACACCAAGGTGCTAACCGGTCATACGGGATCAGTGCTGTGTCTGCAATATGACGAGCGG
GTGATCATTACTGGATCATCTGATTCCACAGTCAGAGTCTGGGACGTGAACACAGGGGAA
ATGGTGAATACCCTGGTGCATCATTGCGAAGCCGTGCTGCATCTGCGTTTTGACGCCGGA
CTTATGGTCACTTGCTCCAAGGATCGCTCCATTGCCGTGTGGGACATGGTTTCGCCCAAG
GAGATCAACATGCGACGTGTGCTGGTCGGCCATCGTGCAGCTGTCAACGTGGTAGACTTC
GACGACAAGTACATTGTTTCGGCGTCCGGTGATCGCACCATCAAGGTCTGGAATACCTCT
TCATGCGAATTTGTGCGGACACTGAACGGTCACAAGCGGGGAATCGCCTGCCTTCAATAC
CGGGATCGCCTGGTCGTCAGCGGCTCTTCGGACAACACAATAAGATTGTGGGACATCGAG
TTCGGCGCCTGCCTTCGCATACTGGAAGGACACGAAGAACTTGTGCGGTGTATTCGATTC
GACAACAAACGCATTGTGAGCGGAGCTTATGATGGGAAAATCAAGGTGTGGGATTTGCAA
GCAGCCTTAGACCCGCGATCTCCTTCTAGCACCCTCTGCCTACGAACCCTCGTGGAACAC
ACTGGACGAGTTTTCCGACTTCAGTTCGACGAGTTTCAGATTGTCAGCAGTTCGCATGAC
GATTCCATTCTTATTTGGGATTTCCTTACTGTTCCCGAACCTAACCCACCCAGCACATCA
AAGTAA
| SMART |
Beta-TrCP_D (IPR021977) - T[146-185] 3.2E-25 |
| Pfam |
Beta-TrCP_D (IPR021977) - T[147-185] 4.0E-23 |
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[181-293] 9.94E-25 |
| SMART |
F-box_dom (IPR001810) - T[197-236] 4.4E-5 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[198-236] 9.365 |
| Pfam |
F-box_dom (IPR001810) - T[200-236] 8.4E-9 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[292-586] 1.2E-106 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[296-587] 1.97E-74 |
| SMART |
WD40_repeat (IPR001680) - T[298-335] 0.048 - T[338-375] 5.6E-7 - T[378-415] 2.1E-4 - T[421-458] 3.7E-6 - T[461-498] 1.1E-6 - T[501-538] 2.1E-6 - T[550-587] 3.8E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[305-344] 9.038 - T[345-384] 16.223 - T[385-424] 9.807 - T[428-467] 13.449 - T[468-507] 13.75 - T[508-547] 13.148 - T[557-587] 9.573 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[305-596] 59.743 |
| Pfam |
WD40_repeat (IPR001680) - T[310-335] 0.067 - T[341-375] 1.2E-5 - T[426-458] 7.9E-4 - T[464-498] 5.5E-5 - T[502-538] 6.4E-6 - T[553-587] 0.1 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[362-376] 5.2E-10 - T[485-499] 5.2E-10 - T[525-539] 5.2E-10 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[362-376] . - T[402-416] . - T[445-459] . - T[485-499] . - T[525-539] . - T[574-588] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 31.544 % | 225 | 8.06E-65 |
| FBW1A_HUMAN | 81.184 % | 818 | 0 |
| FBW1B_HUMAN | 82.018 % | 803 | 0 |