- Transcript 'Moocci.CG.ELv1_2.S32...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1719.g15515.01.t
Possible name(s)
CXXC1; PHF3; TAF3
Gene model
Location
S1719 [14,414 / 25,365]
Amino acid sequence
Length: 786
>Phmamm.CG.MTP2014.S1719.g15515.01.p
QLGKDIHDFTEQCSHTDPHLNDVVESFNHNHVSVPELIDYLQQMDAVNLAKPVSKFPKPK
SSNFQYPSVGHSHELKHVFSYSPSILHATENFKHEKKLETEQRRRSPMFTIAGKQDLSDD
EEDVGSYASDVSLDADGRNLTKPEDIPIVSGTAASSLTNFPTPPVDDEISEKWENSKPLS
TKKVEESKTQIKPGTGTVRLPSTSKTEEPFWVRQHAAKMEKESSKTSPKILTPAKAPNES
KRHEDNHQKRKYSLDSHSKRETSKHSLWDSPIFSRKSLNPPVTTEAFQKNSCPKSAETSK
SEMKEKLSKSTLKQTKPKISITSRIEEVERLLKDPIVKKTELPGTKPSKTPAKSEGSSFV
AKHVKEIAPKTKDQDHSGPFASPKSMDDAINAVVNRISKEAEEAELMKFSHLIEDSSSSD
EEEAVLHKTEEMLQLEKRGLHKHHEDESPTRPPLTPSPALSTNSLIIDQEMEFKTGSTDR
MSRKEDASLIYTSDDSESDDRKWNLSSREMMLANENPSYGFSEPKQEKRDLVKSKSAKKS
KKKSKSKSGNYDLDRMADSRSDSKHVQKLILKTSRAGDGKVMKIHKEKDIGSNDRERLPV
PKLSASISVPVTSNEKKKERKDKKKKKQREKEKDFKIKSKEESPIPKLTFKMTSSDHHVS
IVKPSKMKRPSIDDKVHVPAKKHDNKKETKSLVERKVITQTISVASAGVGVIIDAQGNQV
WICPGCNKPDDGSPMIGCDKCDGWYHWPCVRITQEPPESEEWYCPSCAKQKQKLKKKNSK
SKNKLK
Nucleotide sequence
Length: 3,229
>Phmamm.CG.MTP2014.S1719.g15515.01.t
TCAGCTTGGAAAGGACATTCATGACTTTACAGAGCAGTGTTCTCACACAGACCCTCACCT
AAATGATGTTGTGGAGAGCTTTAATCACAATCATGTCTCTGTTCCTGAACTTATTGATTA
CTTGCAGCAAATGGATGCAGTTAACCTTGCAAAACCTGTGTCAAAATTTCCTAAACCCAA
GAGTTCAAACTTTCAGTATCCAAGTGTTGGACATTCCCATGAACTGAAGCATGTTTTCAG
CTATTCCCCTTCAATACTACATGCAACAGAAAACTTTAAACATGAAAAAAAGCTTGAAAC
TGAGCAAAGAAGGAGAAGCCCAATGTTTACTATTGCTGGAAAACAAGATCTTTCCGATGA
TGAAGAAGATGTTGGCAGTTATGCTTCAGATGTTTCACTTGATGCAGATGGACGTAACTT
GACCAAACCTGAAGATATTCCAATTGTGTCTGGGACAGCTGCAAGTAGTCTGACTAATTT
TCCCACTCCACCAGTTGATGATGAAATTAGTGAAAAATGGGAGAACTCCAAACCTTTGTC
CACCAAAAAAGTTGAAGAGTCAAAAACACAAATAAAACCAGGAACTGGCACTGTTCGATT
ACCATCAACCAGCAAAACTGAGGAACCATTCTGGGTAAGACAACATGCTGCTAAAATGGA
AAAGGAAAGTTCAAAAACTTCCCCCAAGATACTAACCCCTGCTAAAGCACCAAATGAAAG
CAAAAGACATGAAGACAACCATCAAAAACGAAAGTACAGTTTGGATAGCCATTCAAAGAG
AGAAACAAGTAAACACAGTTTATGGGATTCTCCAATATTTTCACGCAAATCTCTAAATCC
ACCAGTAACAACCGAGGCATTTCAAAAAAACTCCTGTCCCAAATCAGCTGAGACAAGCAA
ATCTGAAATGAAAGAGAAATTGTCTAAATCAACATTAAAGCAGACAAAACCAAAAATATC
TATAACATCTCGCATTGAAGAAGTTGAAAGGCTTCTTAAAGATCCAATAGTAAAGAAAAC
AGAATTACCAGGAACAAAACCGTCTAAAACTCCAGCCAAATCAGAGGGTTCAAGCTTTGT
TGCCAAACATGTCAAAGAGATTGCTCCTAAAACTAAAGATCAAGACCATTCTGGGCCGTT
TGCATCACCCAAATCGATGGATGATGCCATCAATGCAGTAGTAAATCGAATTTCCAAAGA
AGCTGAGGAAGCAGAACTGATGAAGTTTTCTCATTTAATTGAGGATTCAAGTTCATCAGA
TGAGGAAGAGGCAGTTTTGCATAAAACTGAGGAAATGCTGCAGCTTGAAAAAAGGGGACT
CCATAAACATCATGAAGATGAATCACCAACCCGGCCACCTTTAACACCATCGCCAGCACT
TTCCACTAATTCTTTGATAATTGATCAAGAAATGGAATTCAAAACTGGAAGCACAGATAG
GATGAGTCGTAAGGAGGATGCATCCCTTATTTATACCTCGGATGATTCTGAGAGTGATGA
CAGAAAATGGAATTTATCATCAAGAGAGATGATGCTTGCCAATGAAAATCCCTCATATGG
TTTTAGTGAACCAAAACAGGAGAAGCGGGACTTGGTAAAAAGTAAATCTGCAAAGAAGTC
TAAAAAGAAAAGTAAATCTAAAAGTGGAAATTATGATTTGGACAGAATGGCTGATTCAAG
AAGTGATTCGAAACATGTACAGAAACTTATTCTCAAGACATCAAGGGCTGGTGATGGTAA
AGTTATGAAGATTCACAAGGAAAAAGACATTGGGTCGAATGATCGTGAACGTTTACCGGT
GCCTAAACTTTCCGCTTCTATATCTGTACCTGTTACTTCTAATGAAAAGAAGAAAGAACG
AAAAGACAAGAAAAAAAAGAAGCAAAGGGAAAAGGAAAAAGACTTCAAAATTAAAAGTAA
AGAAGAGAGTCCAATTCCCAAACTTACTTTCAAAATGACATCAAGCGATCATCATGTGAG
TATTGTTAAACCATCAAAAATGAAAAGACCATCAATAGATGATAAGGTTCATGTACCAGC
AAAGAAGCATGACAACAAAAAAGAAACAAAATCATTAGTAGAACGGAAGGTTATTACACA
AACCATCAGTGTTGCATCAGCTGGTGTTGGTGTCATAATTGATGCACAAGGAAATCAAGT
TTGGATTTGTCCTGGGTGCAATAAACCCGATGATGGAAGCCCTATGATTGGTTGTGATAA
ATGTGATGGCTGGTATCATTGGCCATGTGTACGAATAACTCAAGAGCCACCAGAGAGCGA
GGAATGGTATTGTCCCTCTTGTGCAAAGCAAAAACAAAAGCTTAAGAAAAAGAACAGCAA
ATCAAAAAATAAACTTAAATAGCGAAGAAAGTAAATTATACTTTTATTGCTGTTTGTTGA
ATGTCATGAGGTATGATTTATCCTGGAATGCAGTTTAAGAATTGTAATATGAGGAGGATG
TGGACAAAACCACCGCTTAGCTTTCATTGCATCACATTTTGCCTTACTGGACCTTGAAAA
AAGCATTTAACACAAAAAAATGCATTTTGCTATGTTTTAACACCAGGTTGATTGCCAGTT
TTTAGTGCTTTACTTGATTAGTTCAGTCTAGGCATTTTATCCTAACAAATTTTTATAAGA
CACATTTGCTCCCAACATTGAGGTAGGATATGTCACGGAATCTCGTTTAAATACTTCGCT
TTTTATGGTTGGGAAGATGTACACCGTGCGCATTGCATCGAAACCAATACCACTCGGGGG
GGGGGGCTTTTTATTGTTGGGAAGATGTACACCGTGCGCATTGCATCGAAACCAATACCA
CTCGCTGTTCCACTAGAGATGTATTTGTCAGCTTTTTCTTTGCCCAGGATCGCTTAGCTG
GTGGACAAAGAACGATTTGTTGCACCTGTGCCAAATAATACGTTTTAATTCACCAGTACT
ATGTGGAAGTTTCCCCTAAACTACAGGATACTGGGTGATGATAAAAGGGTATGTCTTCAC
TTGTCAATCAGAATTTTGGCTTGAACTGTTTCGGGTGAGCCCTTATATACATTCAAATAG
GCGGTTTGCCGTGACATAAGAAAGAATTTTAGTATACTGGTTTCATTGGATACTTTTTTG
ATCAACATTTAGTTGTGTGTGTATTGTGACGTTATTGTTTGTTTATGCTGTTCAAGAAGG
TTTACTGATTGTTGAGTTGTCATCACAGAATTCAATGTAAGAATCCTCA
| PANTHER |
TAF3 (IPR037815) - T[1-783] 1.4E-49 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[709-777] 3.0E-22 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[716-771] 1.2E-17 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[720-770] 9.873 |
| SMART |
Znf_PHD (IPR001965) - T[722-768] 7.0E-13 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[722-769] 2.3E-10 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[723-767] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TAF3_HUMAN | 64.865 % | 125 | 1.62E-29 |