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  1. Transcript 'Cisavi.CG.ENS81.R0.1...' > 
  2. Transcript 'KH2012:KH.L170.28.v4...' > 
  3. Transcript 'KH2012:KH.S494.5.v1....' > 
  4. Clone 'cien42555' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1734.g15543.01.t

Possible name(s)

VIPAS39

Gene model

Phmamm.CG.MTP2014.S1734.g15543

Location

S1734 [23,927 / 26,250]

Sequences

Amino acid sequence

Length: 228

>Phmamm.CG.MTP2014.S1734.g15543.01.p
MLQNILWYYFDADIRLANDTSAIFEQISMMERQSAVEDGDSAAEKTGQVMVFKSHPRKES
IIHKPVIDTLFYCCYYHWGEAEGLLSSPTSIRNQHKISEKQFMFTAVAALCRMRRWRDIE
NLLTVPRTLFRSARLQAVIGFDRVVDVLSKNLAPGDALAKYCAEIETSDKRLEMAVKLKC
FKVAIDTFVYQRDRQQLMLYLDQIPQANQHMRQYCSNQLRSQEIKWKN

Nucleotide sequence

Length: 687

>Phmamm.CG.MTP2014.S1734.g15543.01.t
ATGTTACAGAACATTCTTTGGTATTATTTTGATGCGGATATCAGACTAGCGAATGATACG
AGTGCAATATTTGAACAAATTTCTATGATGGAACGACAATCAGCAGTTGAGGATGGTGAC
AGTGCAGCTGAAAAAACTGGACAAGTTATGGTTTTCAAAAGTCATCCCCGTAAAGAATCT
ATCATCCACAAACCAGTGATTGACACCTTGTTCTACTGTTGTTATTACCATTGGGGAGAG
GCAGAGGGTCTTCTTAGTAGTCCCACATCAATTCGAAATCAGCACAAAATAAGTGAAAAG
CAATTTATGTTCACAGCAGTAGCAGCATTGTGCAGAATGAGAAGGTGGAGAGATATTGAA
AACCTTTTAACTGTTCCCCGTACATTGTTTCGGAGCGCAAGATTACAAGCAGTAATCGGT
TTTGATCGAGTTGTTGATGTTTTGAGCAAAAATCTGGCTCCTGGAGATGCTCTTGCCAAA
TATTGTGCTGAAATTGAAACTTCTGACAAGAGACTTGAAATGGCGGTCAAGTTGAAATGT
TTTAAAGTTGCAATTGATACGTTTGTATATCAGCGTGACCGACAACAACTAATGTTGTAC
TTGGATCAAATCCCACAGGCCAATCAACATATGAGACAATATTGTTCAAACCAATTAAGA
TCACAGGAAATAAAATGGAAAAACTGA

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[9-181] 3.6E-7
Pfam
Vps16_C (IPR006925) - T[90-211] 1.9E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 39.623 % 159 3.19E-46