- Clone 'cima825578' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S175.g04759.01.t
Possible name(s)
Phmamm.CG.MTP2014.S175.g04759
Gene model
Location
S175 [205,902 / 208,518]
Amino acid sequence
Length: 871
>Phmamm.CG.MTP2014.S175.g04759.01.p
MALNKQILYFESVDNVYRRTISAVDLKQFRREHWLSACEYFLGATLRKYCDHRGKEKNAD
VTGRIIHEIGRVYRRRTPDKMSLIKSAVLFNAALQREPGNSAEICEDLKELCMHVLQLAK
SVDVRADMVNQAKITKSKINALRQLVKKHFNVSTPQASASNNPEKLNNIERIENLQLEVT
KGYSDAMKGIMTFCVNAVGPIPCAYALVGMGSLAKQEITPYSDFENLIVLQEGVQNRSNY
EEILEYFRWVAVLFQIILVNMGETILPFMDIFALRGWLYDAFTKCGVSPDGFAPQASKNP
LGRQQATPSKPWTTELIKPVGEMLKYTKPIHDLKNGYHLADMLGKTCFVAGDELVYEEFA
EGVRENSGAREEKFFEEVRGDLKNFSIMSRLPYVQDSRQLDVKRVLFRVTTLFVSALGRY
HKIQAPSSFKITRKLVTCGAIGKEFGDDVLYSLGVACEVRQKVYSRLEAQEDRLQNKKRE
NESTIVDLLGEETAIFYFETAWKLQLLVAETVGGENPLERDEEDPVMTRMWIYYSLSLWS
RTLEACRQLKLLDLPTDDIEPKHALLIGLCYVKLEQYKEALKYLQAVEIKLQDSESLDLL
VSQTEIRNCLMKLGYQAEAMESLGKSVDIRNKLIGGRGVPDLWNAVTMMSKNMVQHPLVD
DKQESHHVIAKRLHFYGHVCRGRQEMQLALMFYLRELEIRKQLTAEHLRDKKVAKCYLYV
GECYLYLKDLEKADEYLERAGTIYALNNFTPVRGMVLELNRAQVAILRKQYDRAMAHFRN
QLELELGNDEKNLLRIGSCHCGIGTANLYKGNYDESIECFETAIDVYALSKVEVLRDQSI
AFCHRWIGEVKRQKKVAEAKKELPHTSSQQP
Nucleotide sequence
Length: 2,616
>Phmamm.CG.MTP2014.S175.g04759.01.t
ATGGCACTGAACAAACAGATCCTTTACTTTGAGTCAGTTGACAATGTTTACAGGAGAACG
ATAAGCGCGGTTGACCTCAAACAATTTCGTCGCGAACACTGGTTGTCTGCTTGTGAATAT
TTCCTCGGGGCCACCTTGAGGAAATATTGCGACCACCGTGGCAAAGAAAAAAATGCTGAC
GTCACAGGCAGGATTATTCATGAAATTGGGCGAGTTTACAGACGAAGAACTCCCGACAAA
ATGTCACTCATTAAATCTGCGGTTCTGTTTAACGCAGCTTTACAGCGTGAACCTGGAAAT
TCAGCCGAAATATGTGAAGACTTAAAAGAACTTTGCATGCATGTTCTTCAGCTTGCTAAA
TCGGTCGACGTAAGAGCTGACATGGTAAACCAGGCAAAAATTACCAAATCTAAGATCAAC
GCGCTAAGACAACTTGTCAAAAAACATTTTAATGTTTCTACCCCACAAGCGTCTGCATCC
AACAATCCTGAAAAACTTAACAATATTGAAAGAATCGAAAACTTACAATTGGAAGTGACA
AAAGGATATAGTGACGCAATGAAAGGTATCATGACGTTTTGTGTCAATGCTGTTGGGCCG
ATTCCTTGCGCTTACGCTTTGGTAGGTATGGGTTCGCTTGCAAAGCAAGAAATTACTCCT
TATTCTGACTTCGAAAACCTCATAGTCTTACAGGAGGGCGTTCAAAATCGGAGCAACTAC
GAAGAGATACTAGAATATTTCCGCTGGGTGGCGGTGTTGTTTCAAATTATCTTGGTAAAT
ATGGGAGAAACGATTCTCCCTTTTATGGACATTTTTGCATTGCGCGGTTGGCTGTATGAC
GCTTTCACTAAATGTGGTGTATCGCCTGATGGCTTCGCCCCCCAGGCAAGCAAAAATCCG
CTCGGAAGACAGCAGGCTACACCGTCAAAACCGTGGACCACTGAACTGATCAAACCAGTC
GGCGAAATGCTGAAATACACCAAACCCATTCATGATCTTAAGAACGGCTACCATTTGGCT
GATATGCTGGGCAAAACCTGTTTCGTAGCGGGAGACGAGTTGGTGTATGAAGAGTTTGCT
GAGGGAGTGCGCGAAAACTCCGGAGCCAGAGAAGAGAAGTTTTTTGAAGAGGTTCGCGGC
GACTTAAAGAACTTTTCAATCATGTCGCGACTTCCTTATGTGCAAGATTCACGTCAACTC
GATGTTAAACGAGTCCTGTTTCGCGTAACTACGCTATTTGTGTCAGCTCTTGGTCGATAT
CATAAAATCCAAGCGCCATCATCGTTTAAAATCACTCGTAAACTGGTCACATGCGGCGCT
ATTGGAAAGGAATTTGGTGATGACGTGTTGTACTCGCTTGGTGTCGCTTGTGAGGTTCGT
CAGAAAGTGTACAGCCGCTTGGAGGCGCAAGAGGACCGCTTACAAAACAAGAAGCGCGAA
AATGAGTCGACTATTGTGGACCTCTTAGGCGAAGAGACCGCCATCTTCTACTTTGAGACT
GCTTGGAAACTGCAGCTCTTGGTGGCTGAAACTGTTGGTGGTGAAAATCCGTTAGAACGA
GACGAGGAGGACCCAGTTATGACAAGGATGTGGATCTACTACTCGTTGAGTCTTTGGAGT
AGAACTCTGGAAGCTTGTCGCCAGCTAAAACTACTCGACCTTCCGACTGATGATATTGAG
CCAAAGCATGCCTTGCTCATTGGTTTGTGTTACGTGAAGCTTGAGCAGTACAAGGAGGCC
TTGAAGTATCTGCAAGCTGTCGAAATCAAGTTGCAAGATAGCGAAAGCCTAGATTTACTT
GTGAGCCAAACCGAAATCCGAAACTGCCTTATGAAATTGGGTTATCAAGCAGAAGCTATG
GAATCGTTAGGTAAAAGTGTAGATATTCGAAACAAACTCATAGGGGGTCGCGGGGTGCCT
GATTTGTGGAACGCTGTGACAATGATGAGTAAGAATATGGTGCAGCACCCCTTGGTAGAT
GATAAACAGGAGAGCCATCACGTGATTGCCAAGCGCTTACATTTCTACGGCCACGTTTGC
CGTGGACGCCAAGAGATGCAACTGGCCCTGATGTTTTACTTGAGGGAGCTAGAGATCAGG
AAACAGCTCACTGCCGAACATCTGAGGGATAAAAAGGTAGCGAAATGTTATCTGTACGTC
GGGGAGTGCTACTTGTACCTTAAAGATCTCGAAAAAGCTGATGAGTACTTGGAACGCGCT
GGGACAATTTACGCCCTGAATAATTTTACCCCAGTTCGTGGAATGGTCCTGGAGCTGAAC
CGAGCTCAAGTGGCCATTCTGCGCAAACAGTATGATCGCGCCATGGCGCACTTTCGCAAC
CAGCTTGAGCTTGAACTGGGGAATGATGAGAAGAATTTACTCCGAATTGGTTCCTGCCAT
TGCGGCATCGGCACCGCGAATCTGTACAAAGGAAACTACGATGAATCAATAGAGTGTTTC
GAAACTGCGATTGATGTATACGCCCTGTCGAAAGTAGAGGTTTTACGTGATCAGAGCATT
GCGTTCTGCCATAGGTGGATCGGTGAAGTAAAGAGACAGAAAAAAGTGGCTGAAGCCAAG
AAGGAATTACCTCATACATCATCGCAACAGCCATGA
| Pfam |
GlnD_Uridyltrans_N (IPR005105) - T[172-259] 1.4E-5 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[452-650] 8.3E-7 - T[651-741] 5.1E-8 - T[753-863] 1.2E-9 |
| SMART |
TPR_repeat (IPR019734) - T[561-594] 17.0 - T[714-747] 22.0 - T[755-788] 39.0 - T[797-830] 0.13 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[565-743] 4.75E-7 - T[670-826] 4.43E-14 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[714-830] 9.126 |
| Pfam |
TPR_repeat (IPR019734) - T[716-744] 0.19 - T[801-826] 0.043 |
| Protein Name | Identity | Bit Score | e-value |
|---|