- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocci.CG.ELv1_2.S42...' >
- Clone 'cien53308' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S176.g04768.01.t
Possible name(s)
HDAC1; HDAC2; HDAC3
Gene model
Location
S176 [101,354 / 109,817]
Amino acid sequence
Length: 476
>Phmamm.CG.MTP2014.S176.g04768.01.p
MALTNPGGNRKVCYYYDSDIGNNYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKC
IADEMSKYHSDDYIKFLRSIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVA
GAVKINKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLSILELLNNESIQLPLAGAVKI
NKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLSILELLKYHQRVLYIDIDIHHGDGVE
EAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYALNFPLRDGMDDECYEQIFQPV
ITKVMEYYQPSAVVLQCGADSLTGDRLGCFNLTVKGHAKCLEYVKKFNIPVLMLGGGGYT
IRNVARCWTYETAVALGQEIPNELPYNDYFEYFGPDFKLHISPSNMSNQNTTEYLHKIRQ
RLFENLRMLPHAPGVQMADIPPDAVAEESEDEAMEDPDKRTSSKDLLMLLVCVLVY
Nucleotide sequence
Length: 1,431
>Phmamm.CG.MTP2014.S176.g04768.01.t
ATGGCGTTGACCAATCCAGGTGGAAATCGCAAAGTTTGCTACTACTATGACTCTGATATT
GGAAACAACTATTATGGCCAGGGACATCCAATGAAACCTCACCGCATTCGTATGACCCAC
AATCTGCTCCTGAACTATGGCCTCTACAGGAAGATGGAAATATATCGCCCACATAAATGC
ATTGCTGATGAAATGTCAAAATACCACAGTGACGATTACATCAAATTCCTTCGCAGCATT
CGTCCAGATAACATGTCAGAATATACCAAACAAATGCAAAGATTTAATGTTGGAGAGGAT
TGTCCTGTGTTTGACGGACTTTATGAATTCTGCCAACTGTCTGCTGGAGGTTCTGTCGCT
GGTGCAGTAAAGATCAACAAGCAACAAACTGACATTGCAATTAACTGGGCTGGTGGACTC
CATCATGCAAAGAAGTCTGAAGCATCTGGTTTCTGTTACGTGAATGATATCGTACTCTCC
ATTCTCGAATTGCTCAATAATGAATCTATTCAATTGCCTTTAGCTGGTGCAGTGAAGATT
AACAAGCAACAAACTGACATTGCTATTAACTGGGCTGGTGGACTCCATCATGCAAAGAAG
TCCGAGGCATCTGGTTTCTGTTATGTGAATGATATCGTACTCTCCATTCTCGAATTGCTC
AAATATCACCAGCGTGTACTTTACATCGACATCGACATTCACCATGGCGATGGGGTGGAA
GAAGCTTTCTACACGACTGATCGAGTTATGACCGTCTCGTTCCACAAATATGGGGAATAT
TTCCCTGGAACTGGAGACCTCCGTGACATTGGAGCAGGCAAGGGCAAATATTATGCGCTC
AACTTTCCTCTCAGAGATGGAATGGACGATGAATGTTACGAACAAATCTTCCAACCTGTT
ATCACTAAGGTGATGGAGTATTACCAACCCAGTGCAGTTGTGCTACAGTGTGGAGCTGAT
TCACTCACTGGAGACCGACTCGGTTGCTTCAATCTCACTGTTAAAGGCCATGCCAAATGT
CTTGAATATGTGAAGAAGTTTAACATCCCTGTACTGATGCTGGGAGGAGGAGGTTACACA
ATTCGTAACGTTGCACGATGTTGGACTTACGAAACTGCTGTGGCTCTGGGACAAGAAATT
CCAAATGAACTTCCATACAACGATTACTTTGAATACTTTGGTCCTGATTTTAAGCTGCAT
ATTAGTCCAAGCAACATGTCCAACCAGAACACGACCGAATATCTCCACAAGATCCGACAA
CGTTTGTTCGAGAATCTGAGGATGCTACCACATGCTCCTGGTGTTCAAATGGCTGACATT
CCACCAGATGCAGTGGCTGAGGAAAGTGAGGATGAAGCAATGGAGGATCCTGACAAGCGG
ACATCAAGTAAGGATTTATTGATGTTGCTTGTTTGTGTGCTTGTCTATTGA
| PIRSF |
His_deacetylse_1 (IPR003084) - T[1-173] 2.3E-85 - T[168-467] 1.1E-163 |
| Gene3D |
His_deacetylse_dom_sf (IPR037138) - T[8-170] 4.8E-67 - T[171-431] 3.1E-122 |
| PANTHER |
His_deacetylse (IPR000286) - T[8-167] 1.1E-277 - T[174-464] 1.1E-277 |
| SUPERFAMILY |
Ureohydrolase_dom_sf (IPR023696) - T[11-166] 5.76E-48 - T[174-429] 4.8E-98 |
| Pfam |
His_deacetylse_dom (IPR023801) - T[29-166] 1.7E-27 - T[175-373] 6.5E-67 |
| PRINTS |
His_deacetylse_1 (IPR003084) - T[31-48] 4.4E-44 - T[64-82] 4.4E-44 - T[95-112] 4.4E-44 - T[116-136] 4.4E-44 - T[157-173] 4.4E-44 |
| PRINTS |
His_deacetylse (IPR000286) - T[193-216] 3.4E-24 - T[225-240] 3.4E-24 - T[310-320] 3.4E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDAC1_HUMAN | 74.026 % | 681 | 0 |
| HDAC2_HUMAN | 72.881 % | 684 | 0 |
| HDAC3_HUMAN | 52.018 % | 483 | 3.2E-169 |