- Region 'REG00000058' >
- Transcript 'Cisavi.CG.ENS81.R15....' >
- Transcript 'Cisavi.CG.ENS81.R15....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S178.g04804.04.t
Possible name(s)
AL359736.1; ARHGEF9; SPATA13
Gene model
Location
S178 [51,787 / 55,699]
Amino acid sequence
Length: 756
>Phmamm.CG.MTP2014.S178.g04804.04.p
MSLATNLEQVPEETSRPDKKELSFNKRISSQSIFRAFGKRSRFRLRSSAGSAVKSGVSTS
FVSSNDGSFMSQVYSPRRELLSSAGLPIGSYHGVISRDMTIRRSFEVKRDNKAVASRYTP
QCSRANHDLSLNIVRDRIKSSNVYTEGLVSDNEEDDVFDTDSFRPLNKPLTRSHTHPKQK
TKSISSGCISNESGYGTMTRKGGVYARTAEDEDVFLHANSTQRDEQGSNITNEDVLYVEA
LWDHVTMDNEELGFKVGDVIRVIDMTNSDWWWGELESNEGWFPATFVRILVNQHLHEDVE
GIEIIVTPSPNVPNDVSPDSVTRSRSSSDLCQCTERRSNSSIHCSVCGRPLREAHETPKS
RSTKTPPKFQEPAAPLTVNTRKQSLCRETIRTNVIEEIVNSEKVFVGHLKDVVQRDGFAI
YSEYCNNHPQALALLSQLLAQKKYMHFFEACRLFQRMIEISLDGFLLTPVQKICKYPLQL
AELLKYTSTEHPDNEPVQSALEAMKGVARMINERKRHMENIKKISLWQSSILNWQEEDVL
ERSSELVQSGEMYTLSQTKGKPKWRMAFLFDHQMIFCKKDILRRDLLYYKSRLDLDTCEI
ASLETESPRNSSISANDSISGVGPFQRGWKIVDTVTSETATIYCKNEEDFEKWTKAFKME
RKLSALKRNGMSKAEEYLAKDLVQKSAFSRRPKASSSVRQPVSYRYRVKMAQGVDMNSKQ
KNISVPSEKSAGFFSNMAGKLTPFRRTTTRESSFVF
Nucleotide sequence
Length: 2,271
>Phmamm.CG.MTP2014.S178.g04804.04.t
ATGTCGCTTGCGACAAACTTGGAGCAAGTTCCTGAAGAAACCAGCAGACCAGACAAAAAG
GAATTGTCTTTTAACAAAAGAATTTCTTCGCAATCAATATTTCGTGCTTTCGGCAAGCGC
AGTCGTTTTCGTTTGCGCAGTTCAGCGGGAAGCGCCGTCAAATCGGGGGTCTCGACATCA
TTTGTTTCTTCCAACGATGGCAGTTTTATGAGCCAAGTTTATAGTCCGCGACGGGAGTTG
CTTTCTTCCGCCGGTTTGCCGATTGGCAGCTACCACGGCGTTATTTCCCGAGACATGACA
ATACGACGCAGTTTTGAGGTTAAGCGGGACAACAAGGCCGTTGCTAGCCGATACACACCG
CAATGCTCAAGAGCGAATCACGATCTGTCGCTGAATATTGTTCGTGATAGAATTAAATCT
TCCAATGTTTACACGGAAGGCCTGGTTAGCGACAACGAAGAGGACGATGTTTTTGATACA
GATTCGTTCAGGCCACTTAATAAGCCTTTGACGCGCAGCCATACGCATCCTAAGCAGAAA
ACAAAATCAATCTCTAGTGGCTGCATTTCAAACGAGTCCGGATATGGCACAATGACAAGA
AAAGGTGGAGTTTATGCAAGAACAGCAGAAGATGAAGACGTCTTCCTGCATGCAAACTCC
ACACAGCGCGACGAGCAGGGTTCCAACATTACAAATGAAGACGTTCTGTACGTCGAGGCC
CTGTGGGATCACGTGACCATGGACAACGAAGAGTTGGGTTTCAAAGTAGGTGACGTGATT
CGCGTCATAGACATGACGAACTCTGATTGGTGGTGGGGTGAACTGGAATCCAACGAGGGC
TGGTTTCCTGCAACATTCGTCAGAATTTTGGTGAACCAACATCTTCACGAAGATGTGGAA
GGCATCGAAATCATCGTAACGCCTTCACCAAATGTCCCAAATGATGTGTCGCCTGACTCG
GTCACCCGCAGTCGATCGTCGAGCGATTTGTGTCAGTGCACAGAGCGAAGATCAAACTCT
TCAATTCACTGTTCGGTATGTGGACGTCCTCTGCGAGAAGCACACGAAACGCCGAAATCC
CGCTCGACCAAAACGCCTCCAAAGTTTCAAGAGCCCGCTGCACCCCTGACAGTCAATACC
CGAAAACAATCTCTGTGTAGGGAAACTATACGCACAAACGTCATCGAAGAAATTGTGAAC
TCCGAGAAGGTGTTTGTTGGTCACCTGAAAGACGTCGTCCAGAGGGATGGATTTGCAATT
TACTCCGAATATTGCAACAACCACCCCCAAGCTCTGGCTCTTCTCTCTCAACTTCTTGCA
CAAAAGAAGTACATGCACTTTTTCGAAGCATGTCGCCTATTTCAGCGCATGATTGAAATT
TCTCTCGACGGATTTTTGTTGACTCCTGTTCAAAAAATATGCAAATACCCCCTCCAGTTG
GCTGAGTTACTCAAATACACGTCAACCGAGCATCCCGACAACGAACCCGTCCAATCAGCA
CTCGAAGCCATGAAAGGAGTTGCACGGATGATTAATGAGCGTAAGCGTCATATGGAAAAT
ATCAAGAAAATTTCACTCTGGCAGTCATCGATACTTAATTGGCAGGAAGAAGACGTTCTG
GAACGAAGCAGTGAGTTGGTACAATCTGGTGAGATGTACACACTCTCACAAACCAAAGGG
AAACCTAAATGGAGGATGGCCTTTCTGTTTGATCATCAAATGATTTTTTGCAAAAAGGAC
ATTTTAAGACGTGATCTTCTTTACTATAAATCCCGACTGGATCTCGACACATGTGAAATT
GCATCACTGGAGACGGAATCGCCAAGAAACAGTTCTATCTCCGCCAACGACTCAATTTCA
GGGGTTGGGCCGTTTCAAAGAGGCTGGAAAATTGTTGACACTGTCACGTCAGAAACTGCT
ACAATTTACTGCAAAAATGAAGAAGATTTTGAAAAATGGACGAAAGCGTTTAAAATGGAA
CGAAAACTTTCTGCATTGAAACGAAACGGCATGTCAAAAGCTGAAGAATATTTAGCGAAA
GATCTTGTCCAAAAGTCCGCATTTTCTCGCCGACCCAAAGCATCATCATCGGTTCGTCAA
CCAGTTTCATACCGTTATCGTGTGAAAATGGCACAAGGAGTTGATATGAATTCAAAACAA
AAAAACATTTCTGTGCCATCCGAGAAGTCGGCGGGATTTTTCAGCAACATGGCTGGCAAA
CTTACGCCGTTCCGGCGCACCACCACGCGGGAAAGCAGTTTTGTTTTCTGA
| ProSiteProfiles |
SH3_domain (IPR001452) - T[233-292] 24.346 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[234-313] 8.79E-21 |
| SMART |
SH3_domain (IPR001452) - T[236-291] 2.6E-18 |
| Pfam |
SH3_domain (IPR001452) - T[240-287] 7.4E-12 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[387-531] 5.23E-37 |
| SMART |
DH-domain (IPR000219) - T[394-513] 1.4E-14 |
| CDD |
DH-domain (IPR000219) - T[395-512] 5.59327E-23 |
| Pfam |
DH-domain (IPR000219) - T[402-512] 5.0E-25 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[403-514] 20.94 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[412-536] 4.0E-42 |
| ProSitePatterns |
GDS_CDC24_CS (IPR001331) - T[462-487] . |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[537-696] 1.8E-30 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[545-662] 9.034 |
| SMART |
PH_domain (IPR001849) - T[546-664] 7.2E-8 |
| Pfam |
PH_domain (IPR001849) - T[547-659] 4.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARHG4_HUMAN | 41.468 % | 365 | 3.52E-116 |
| SPT13_HUMAN | 39.781 % | 350 | 7.43E-111 |
| ARHG9_HUMAN | 40.781 % | 345 | 1.5E-110 |