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  1. Clone 'ma193i12' > 
  2. Transcript 'Cisavi.CG.ENS81.R54....' > 
  3. Transcript 'Moocci.CG.ELv1_2.S55...' > 
  4. Transcript 'Cisavi.CG.ENS81.R132...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1797.g15665.01.t

Possible name(s)

NLRP12; NOD1; NOD2

Gene model

Phmamm.CG.MTP2014.S1797.g15665

Location

S1797 [592 / 9,322]

Sequences

Amino acid sequence

Length: 1,222

>Phmamm.CG.MTP2014.S1797.g15665.01.p
MLNTTRNLALMLNILILDNVRQTMRKLEDMNLQIPETFSPTSEAGSSTGEKRCTKHDSPD
LKRCKLEIEDSDSESSVDSDEENDAMATTVEKLHQHLKTVVDEKCGREYGRAVEPVDLVL
VKYIGQKDRDPEKQREKLARVVDEGNELKVATTVEKLHQHLKTIVDEKCGREYGRAVEPV
DLVLVKYIGQKDRDPEKQREKLARVVDEGNELKGDITVENMFERAKIEAGDIEKDEKSVG
VVGAVGVGKSTLTKVIVQKILDKNILSNASLVFYITVGTIDLERETDLFELLFLPLIAKG
SILLGKPEKQELINFILQDPNIVVIIDGLDEAKTDKLKTSHPLVSPYGKAKPMALLFNIL
KGNLLANAYKLVTSRITQFIDASPEYRPKFVLEILGLAPSEQQKLARCVCGEQFDQVWEN
LEDNQALLECCVVPGGGGIIDGLDEAKTDKLKNSHPLVSPYGKAKPMALLFNILKGNLLA
NAYKLVTSRITQFIDASPEYRPKFVLEILGLAPSEQQKLARCVCGEQFDQVWENLEDNQA
LLECCVVPVNMLMTINFLLGGGTLDTITLTGVYIAMLNRYIRSKLCTFPDCMDVVEKLSD
LATFGFENNITMFFVEDLMKFNIPLPAQEAFVNVALESDANLAIRILQQDKVSYFVHRSW
QELLVALRLVLFMSLYEFKAFLKNAFESGDLENVVKFCFGICKDTVFKKARRLSPAAQVG
EIEEKKKFLGLIAESKAKKLSESVIESDEEHDMQKWFYLFSCLNELGSDDISLPVAKLLP
NNASIEDLMKFNIPLPAQEAFVNVALESDANLAIRILQQDKVSYFVHRSWQELLVALRLV
LFMSLYEFKAFLKNAFESGDLENVVKFCFGICKDTVFKKARRLSPAAQVGEIEEKKRGGG
FLGFIAESKAKKLSESVIESDEEHDMQKWFYLFSCLNELGSDDIGLPVAKLLPTNANIEG
SAFSSDITNMASLYKLNNTNLKLKSVNLSFVGNALHSFGNFVQEHRVKSLLKLAYSIKEG
LQQIDDSHQVKELWFNHIPLEDEGVTILSSEVHKVADLSIRDIGMTSVGAVKLGEHLEME
NTLSMIPLLDLSRNKFGDTGAQELAKCLHLIQGVDLRECDITSTGAEALVDGLSQLQTPM
TSLDLSENIIGDDGIKKLSKVLHKVKKLYLRGCGMTCAGLSTLAAGLSTRMEQLDLDRKA
QSGAKANDLKKLELNVKALKWF

Nucleotide sequence

Length: 3,669

>Phmamm.CG.MTP2014.S1797.g15665.01.t
ATGCTGAACACCACTAGGAATTTAGCTTTGATGCTAAATATTTTGATTTTAGACAATGTT
CGGCAAACCATGAGAAAACTTGAAGATATGAATCTACAGATTCCTGAAACTTTTTCTCCA
ACATCAGAAGCAGGAAGCTCAACAGGGGAAAAAAGATGTACTAAGCATGATTCCCCAGAC
CTGAAACGTTGCAAGTTAGAAATTGAAGATTCAGATTCTGAGAGTTCAGTAGATTCTGAT
GAAGAAAATGACGCCATGGCCACCACAGTAGAAAAATTGCACCAGCATCTGAAGACAGTA
GTGGATGAAAAATGTGGTAGAGAATATGGAAGAGCAGTGGAACCAGTTGATCTTGTGCTT
GTAAAATATATTGGACAGAAAGACAGAGATCCTGAAAAACAACGAGAAAAATTGGCTCGA
GTGGTAGATGAGGGAAATGAACTGAAAGTGGCCACCACAGTAGAAAAATTGCACCAGCAT
CTGAAGACAATAGTAGATGAAAAATGTGGTAGAGAATATGGAAGAGCAGTGGAACCAGTT
GATCTTGTGCTTGTAAAATATATTGGACAGAAAGACAGAGATCCTGAAAAACAACGAGAA
AAATTGGCTCGAGTGGTAGATGAGGGAAATGAACTGAAAGGTGATATCACAGTTGAAAAC
ATGTTTGAAAGAGCAAAGATTGAAGCAGGAGACATTGAAAAAGATGAAAAGTCAGTTGGC
GTTGTTGGTGCAGTTGGAGTGGGAAAGAGCACATTGACAAAAGTAATTGTGCAAAAAATT
TTAGATAAAAATATTCTTTCCAATGCTTCACTAGTATTTTACATCACAGTTGGCACCATC
GACCTTGAGCGAGAAACTGATTTATTTGAATTGCTTTTCTTGCCCCTGATTGCAAAAGGA
AGTATTTTATTAGGAAAACCAGAGAAACAGGAGCTGATTAATTTCATCTTGCAGGATCCC
AACATAGTAGTAATCATTGATGGTCTGGATGAAGCTAAAACAGACAAATTAAAAACATCA
CATCCACTAGTTTCACCATATGGCAAAGCAAAACCAATGGCTCTATTATTTAATATTTTG
AAAGGAAATCTGCTTGCCAATGCTTATAAGTTGGTAACATCAAGGATTACTCAATTTATT
GATGCTTCTCCAGAATACAGACCAAAATTTGTTTTGGAAATTTTGGGGTTAGCCCCAAGT
GAACAGCAAAAACTTGCTAGGTGTGTATGTGGTGAACAGTTTGATCAAGTTTGGGAAAAT
TTAGAGGACAACCAGGCTTTGCTTGAATGCTGTGTAGTACCTGGGGGGGGGGGGATCATT
GATGGTCTGGATGAAGCTAAAACAGACAAATTAAAAAATTCACATCCACTAGTTTCGCCA
TATGGCAAAGCAAAACCAATGGCTCTATTATTCAATATTTTGAAAGGAAATCTGCTTGCC
AATGCTTATAAGTTAGTAACATCAAGGATTACTCAATTTATTGATGCTTCTCCAGAATAC
AGACCAAAATTTGTTTTGGAAATTTTGGGGTTAGCACCAAGTGAACAGCAAAAACTTGCT
AGGTGTGTATGTGGTGAACAGTTTGATCAAGTTTGGGAAAATTTAGAGGACAACCAGGCT
TTGCTTGAATGCTGTGTAGTACCTGTCAACATGCTTATGACAATTAACTTTCTGTTAGGT
GGTGGGACATTAGATACTATTACACTCACAGGTGTTTACATTGCAATGTTGAACAGATAC
ATTCGTTCAAAACTTTGCACTTTTCCTGACTGCATGGATGTTGTTGAAAAACTTTCTGAT
CTAGCAACCTTTGGTTTTGAAAACAACATTACAATGTTTTTTGTGGAAGATTTGATGAAA
TTTAACATTCCTCTGCCAGCACAAGAAGCATTTGTCAATGTAGCTCTAGAATCAGATGCT
AATCTTGCAATTCGCATTTTGCAACAAGACAAAGTTAGCTACTTTGTTCATCGGTCCTGG
CAAGAGTTGTTGGTTGCGCTCAGACTTGTTCTGTTTATGTCATTGTATGAGTTCAAAGCT
TTCCTTAAAAATGCTTTTGAGTCTGGAGATTTGGAAAATGTTGTAAAGTTTTGTTTCGGC
ATTTGCAAAGATACTGTGTTTAAAAAAGCAAGACGACTTTCTCCTGCAGCACAAGTTGGT
GAAATAGAAGAGAAGAAAAAGTTTCTTGGTTTAATTGCTGAATCTAAAGCAAAGAAACTG
TCAGAGAGTGTAATAGAAAGTGATGAAGAACATGATATGCAAAAGTGGTTTTATCTTTTC
TCATGTTTGAATGAACTTGGCAGTGATGATATTAGCTTACCTGTTGCCAAACTTCTGCCC
AATAATGCTAGTATAGAGGATTTGATGAAATTTAACATTCCTCTGCCAGCACAAGAAGCA
TTTGTCAATGTAGCTCTAGAATCAGATGCTAATCTTGCAATTCGCATTTTGCAACAAGAC
AAAGTTAGCTACTTTGTTCATCGGTCCTGGCAAGAGTTGTTGGTTGCGCTCAGACTTGTT
CTGTTTATGTCATTGTATGAGTTCAAAGCTTTCCTTAAAAATGCTTTTGAGTCTGGAGAT
TTGGAAAATGTTGTAAAGTTTTGTTTCGGCATTTGCAAAGATACTGTGTTTAAAAAAGCA
AGACGACTTTCTCCTGCAGCACAAGTTGGTGAAATAGAAGAGAAGAAAAGGGGGGGGGGC
TTTCTTGGCTTTATTGCTGAATCTAAAGCAAAGAAACTGTCAGAGAGTGTAATAGAAAGT
GATGAAGAACATGATATGCAAAAGTGGTTTTATCTTTTCTCATGTTTGAATGAACTTGGC
AGTGATGATATTGGCTTACCTGTTGCCAAACTTCTGCCCACTAATGCTAATATAGAAGGT
TCTGCATTTTCATCTGATATTACAAATATGGCTTCACTTTACAAACTGAACAATACCAAT
CTTAAACTGAAAAGTGTTAATCTGTCATTTGTCGGAAATGCTTTACACAGTTTTGGAAAT
TTTGTGCAAGAACACCGAGTTAAAAGTTTATTGAAATTGGCCTACAGCATTAAAGAAGGA
CTCCAGCAAATTGATGATTCACACCAGGTAAAGGAACTGTGGTTTAATCACATACCCCTG
GAAGATGAAGGTGTGACCATACTTAGCAGTGAAGTTCATAAAGTAGCTGATTTGTCTATC
AGAGACATTGGCATGACATCAGTTGGTGCTGTTAAGTTGGGTGAACATCTTGAGATGGAA
AATACACTGTCCATGATTCCACTCTTGGATTTGTCAAGAAACAAGTTTGGTGATACTGGG
GCTCAGGAACTTGCAAAATGTTTGCATCTCATACAGGGTGTTGACCTGCGTGAGTGTGAT
ATCACTTCTACTGGTGCAGAAGCATTGGTTGATGGATTATCACAGTTACAAACACCGATG
ACTTCACTGGATTTGTCTGAGAACATTATTGGTGACGATGGAATAAAGAAGCTTTCTAAA
GTCTTGCATAAAGTTAAGAAACTCTACTTAAGAGGATGTGGAATGACATGTGCTGGTTTG
TCAACATTAGCTGCTGGATTGTCAACAAGAATGGAACAGCTTGACCTGGATAGAAAAGCT
CAAAGTGGTGCAAAAGCAAATGATTTGAAAAAACTGGAGTTGAATGTAAAAGCTCTTAAA
TGGTTTTAG

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[234-408] 3.99E-9
ProSiteProfiles
NACHT_NTPase (IPR007111) - T[237-375] 13.924
Pfam
NACHT_NTPase (IPR007111) - T[240-409] 1.8E-14
Gene3D
LRR_dom_sf (IPR032675) - T[1025-1221] 2.1E-27
Pfam
Leu-rich_rpt (IPR001611) - T[1089-1105] 0.1 - T[1140-1159] 0.018

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value