Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S179.g04831.01.t

Possible name(s)

IVNS1ABP; KLHL20; KLHL24

Gene model

Phmamm.CG.MTP2014.S179.g04831

Location

S179 [139,096 / 142,522]

Sequences

Amino acid sequence

Length: 416

>Phmamm.CG.MTP2014.S179.g04831.01.p
MNGENHDHGCDLPTCEKADITLTDDVVMKNGHGCIDGLPFDSLSLVSSEDCELSSKGNLH
RKLNSSSDDGSDESDFEDDASLSTARKVYNKKCRMLSILEWSDETHNEETIHHLNVFRKN
RQFCDLVIQVGGKEFYCHRVVLGSMSRAIYNELCSGEQESGPVARIPLNTAQHSWIPDAV
EILIEYMYTSKLVVPSNLVMAVYKACCQLGIDRLTPICRRHIVSELCVDESVATRRLASS
VADIELRGFVDSFIEENFESVVTCNDFLSLPRIKMEITVSASSNLVGCLALGFRDGVLCS
SALSWIYELIQQKGGQYLEELTEQVQKVTSDELQNSVSVCTGMASRKFSLDSDRGCQSDV
SGRHVMPHSTRLSRSSSMDSLKSSDSEEGTAHLESKLDGEWKVIACNQTPGSHCFI

Nucleotide sequence

Length: 1,251

>Phmamm.CG.MTP2014.S179.g04831.01.t
ATGAATGGGGAGAATCATGACCATGGGTGTGATTTGCCGACTTGTGAAAAGGCTGATATC
ACTTTGACCGATGATGTTGTCATGAAAAATGGACATGGATGCATTGATGGGTTACCATTT
GACAGCCTTAGTTTAGTTTCTTCAGAAGATTGTGAACTGTCATCCAAAGGAAATTTGCAC
CGCAAACTTAATTCTTCTTCTGACGACGGTTCAGATGAAAGTGATTTTGAGGATGATGCA
AGTTTATCAACAGCCAGAAAGGTTTACAACAAAAAATGTCGCATGTTGAGTATTTTGGAA
TGGAGTGATGAAACACACAATGAGGAAACAATTCATCATTTAAATGTTTTTCGCAAGAAT
AGACAGTTCTGTGATTTGGTCATTCAGGTTGGCGGAAAAGAATTCTATTGTCACAGAGTT
GTACTTGGTTCTATGTCGAGGGCTATTTACAATGAACTTTGTAGTGGTGAACAGGAATCA
GGACCTGTTGCTAGGATTCCATTAAATACTGCCCAGCACAGTTGGATACCTGATGCGGTT
GAAATTCTGATTGAATACATGTACACATCCAAACTGGTTGTCCCATCAAATTTGGTAATG
GCTGTTTACAAAGCCTGTTGTCAACTTGGAATAGACAGACTCACCCCAATTTGCCGAAGG
CATATTGTTTCAGAACTATGTGTTGATGAAAGTGTTGCTACAAGAAGGCTTGCTTCAAGC
GTGGCAGACATTGAATTGAGAGGCTTTGTGGATTCTTTTATAGAAGAAAATTTTGAGTCA
GTTGTTACTTGCAATGACTTTTTGAGTCTACCAAGAATAAAGATGGAAATCACTGTGTCG
GCCAGCAGTAATCTTGTTGGGTGTTTAGCACTTGGTTTTAGAGATGGAGTGTTGTGTTCT
TCTGCTTTATCTTGGATTTATGAACTTATCCAGCAAAAAGGTGGCCAATATCTTGAAGAA
CTCACTGAACAGGTGCAGAAAGTAACTTCGGACGAACTGCAAAACTCTGTGAGTGTGTGC
ACGGGAATGGCAAGTCGCAAATTTTCGCTGGACTCAGACCGGGGGTGTCAAAGTGACGTC
AGCGGACGGCACGTGATGCCACATAGCACTCGGCTTTCTCGTTCGTCTTCAATGGACTCT
CTGAAATCCTCAGACTCAGAGGAAGGCACAGCACACCTTGAAAGCAAACTTGACGGAGAA
TGGAAAGTGATAGCTTGCAATCAGACTCCAGGTTCACATTGCTTTATTTAA

InterProScan

SUPERFAMILY	SKP1/BTB/POZ_sf (IPR011333) - T[103-224] 6.67E-22
Pfam	BTB/POZ_dom (IPR000210) - T[114-223] 2.6E-16
SMART	BTB/POZ_dom (IPR000210) - T[124-226] 3.2E-12
ProSiteProfiles	BTB/POZ_dom (IPR000210) - T[124-196] 14.087

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
KLH20_HUMAN	26.59 %	79	8.28E-16
NS1BP_HUMAN	31.304 %	117	2.04E-28