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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S181.g04870.01.t

Possible name(s)

NUP133

Gene model

Phmamm.CG.MTP2014.S181.g04870

Location

S181 [36,858 / 48,886]

Sequences

Amino acid sequence

Length: 954

>Phmamm.CG.MTP2014.S181.g04870.01.p
MFTPSRKRPTGSTSRRSTLTPRTNPLRDGSRTSLLRRSLAPRSPAVGNFSSLASPTVTTV
FGSSSHSIQSYDSNLPVLISVCKQLTLPSVEETGDYASDLVWIGPSDRSGNSISVVAVST
LGHIVFWNNILLSTSSNVDAQVEMSAETEQCFNIVSLQPHGFVVTSTTGTLYFVECSIQN
GISCRQLHSATGMLSGIGRRVSSFFFSASPQAIDINQVIGRRLSSKSDYELFLLTSNTLQ
QWKITFNQQNEITNVQVISEIDIFVQLAHKVSEAVWVKGNNKKDLQLWPLDITYASRNGQ
SVLLVAVLDTSDGSSQLHYAACIISDLHNIANVDVVAFEFSSPFDQKKIDNTLLSFKIVV
EDPNYHTVQHIAMWSSERLIVKALMCDDVSKSEDNVPFNIGGDRLLGGGDCGGKYVFLSA
ANGLVTCSTSLQSRLPPSMEESILNNSSSVLQTPDTSLLQSIPGTPVLTQAKMEQLESSD
NCAQRLQAAFLHYCRHNLKQAQSLMAEAFPSGRQNTALDNAVAVVSCDLLDDYPASDPRW
AESVPHDVSSEYGGSSGSLILQHQLEDKQSAHGMFLKFLSEVSRIEEIFEHLIEEELKGV
MNSSLSTKERVTIICGVNAVFETMLTSARNYRRSKTLVYEQAGEQGEILPWTVGAGRMNV
RNLIIQQVFDHGLPEAEDSQQRTVLHQSLSTLADLVLDGYEEQLKSLAQNRQRWAEVNAA
YERHRFQLIEPLLLNGQREKATTLAEKYKDFPTLVRVCDDTKDHSKAQEYMNKFASQGFS
EFLFKWYLDRHEYRKLLACCGDDATERHHDQLTSFLTAHPKLAWMHQVRREVNQEHLLLQ
YQETLPSVVLENLNTDPDTMSVFSPSKLIQLYVGEDNIFSNEVDFKKAFEIIPYLPNNDA
METEEVDMLVDILPDVENLLRREELSDLRHDSSFEYLLRASFEQVLRMQITSAA

Nucleotide sequence

Length: 2,865

>Phmamm.CG.MTP2014.S181.g04870.01.t
ATGTTTACGCCAAGCAGAAAAAGGCCAACTGGTTCCACAAGCAGAAGATCAACATTAACA
CCAAGAACAAATCCTCTTAGGGATGGGTCAAGAACGTCCTTGCTCCGTAGATCCCTTGCT
CCCAGAAGCCCAGCTGTGGGCAATTTTTCATCCCTAGCTTCTCCAACTGTCACCACAGTG
TTTGGATCTTCATCTCATTCTATTCAGTCTTATGATTCTAATTTACCTGTTTTGATTTCA
GTTTGCAAGCAATTAACGTTGCCATCTGTTGAAGAAACTGGTGATTATGCATCAGATCTG
GTCTGGATTGGACCATCTGATCGAAGCGGGAATTCTATTTCAGTGGTTGCAGTATCTACA
TTAGGTCACATTGTTTTCTGGAACAACATCTTATTGTCAACGTCGTCAAATGTTGATGCA
CAAGTTGAGATGTCAGCAGAAACTGAACAATGTTTTAACATTGTTTCTCTGCAACCTCAT
GGTTTTGTTGTTACGTCAACAACTGGAACATTGTATTTTGTGGAGTGTTCTATTCAGAAT
GGTATATCATGTCGTCAACTTCACTCAGCTACTGGGATGTTGTCTGGGATTGGCAGGAGA
GTTTCGTCATTCTTCTTTTCCGCATCCCCACAAGCCATTGATATAAATCAGGTTATTGGA
AGGCGCTTATCTAGTAAAAGTGACTATGAATTGTTTCTTCTCACAAGCAACACCCTTCAA
CAGTGGAAAATCACTTTCAATCAGCAAAATGAAATCACCAATGTTCAAGTTATCAGTGAA
ATAGACATTTTCGTGCAACTTGCTCACAAAGTTTCAGAAGCAGTTTGGGTAAAGGGAAAC
AACAAAAAAGATTTGCAGTTGTGGCCCCTTGACATAACATATGCTTCACGCAATGGACAA
AGTGTGTTGCTTGTTGCTGTGCTTGACACATCCGATGGATCATCTCAACTTCACTATGCT
GCCTGTATTATATCAGATCTTCACAACATTGCCAACGTTGATGTTGTTGCCTTTGAATTT
TCTTCACCATTTGATCAGAAAAAAATAGACAACACCCTGCTATCATTCAAAATAGTGGTT
GAAGACCCCAACTACCACACTGTACAGCACATTGCGATGTGGTCGAGTGAAAGACTGATT
GTGAAGGCTTTGATGTGTGATGATGTTTCAAAGTCAGAAGACAATGTGCCATTTAACATT
GGAGGTGACCGACTTTTGGGTGGAGGGGATTGTGGTGGAAAGTATGTCTTCCTCAGCGCT
GCCAACGGTCTGGTCACGTGTTCAACTTCTTTGCAAAGCCGACTCCCACCTTCCATGGAG
GAATCAATTTTGAACAACTCAAGTTCCGTGTTACAGACTCCTGACACATCGCTGCTCCAA
AGCATTCCAGGTACCCCAGTTTTGACTCAAGCCAAGATGGAACAATTGGAATCGAGTGAT
AACTGCGCACAACGCTTGCAGGCTGCTTTCCTTCACTATTGCCGACATAACTTGAAACAA
GCGCAGAGCTTGATGGCAGAGGCGTTTCCCTCTGGTCGACAGAACACTGCCTTGGATAAC
GCTGTAGCAGTTGTTAGTTGTGACCTTTTGGACGACTACCCTGCCTCAGATCCTCGTTGG
GCCGAGTCAGTGCCGCATGACGTATCTTCGGAATATGGCGGCTCATCGGGTTCTCTTATA
CTTCAGCACCAGCTCGAAGATAAACAAAGCGCTCATGGGATGTTCCTTAAATTCCTTTCA
GAAGTATCACGAATTGAGGAAATATTTGAGCATTTGATAGAAGAAGAGTTAAAGGGCGTC
ATGAACAGTAGCTTGTCCACTAAGGAGCGAGTTACAATCATTTGTGGAGTGAACGCAGTG
TTTGAGACAATGCTCACAAGTGCCCGCAACTACCGGCGATCAAAGACACTAGTGTACGAA
CAGGCTGGAGAACAAGGCGAGATTCTCCCTTGGACGGTCGGGGCTGGCAGAATGAACGTC
CGGAATCTCATTATTCAACAGGTTTTCGATCATGGGCTTCCTGAAGCAGAAGACAGTCAG
CAAAGGACGGTTCTTCATCAGTCACTCTCCACACTTGCTGATCTTGTGTTGGATGGATAC
GAAGAACAATTAAAATCACTTGCGCAAAACAGACAGCGCTGGGCTGAGGTCAACGCAGCT
TATGAGAGACACCGATTTCAGTTAATTGAACCACTACTTCTCAACGGTCAGCGGGAAAAA
GCGACCACTTTGGCTGAAAAATATAAGGACTTTCCCACATTAGTGCGGGTGTGTGATGAT
ACGAAAGATCACTCGAAAGCACAGGAATACATGAACAAGTTTGCATCACAAGGATTTTCG
GAGTTCTTGTTTAAATGGTATCTTGACCGTCACGAGTACCGAAAATTGTTGGCGTGCTGT
GGTGATGACGCAACAGAACGTCACCATGATCAACTGACGTCATTTCTTACAGCTCATCCG
AAACTTGCGTGGATGCACCAAGTTAGAAGAGAGGTAAACCAGGAACATTTGTTATTACAA
TACCAAGAAACGCTTCCATCGGTGGTGCTAGAAAATCTCAACACAGACCCTGATACGATG
TCGGTGTTTTCCCCAAGCAAACTAATACAGCTCTATGTTGGTGAAGACAATATATTTTCG
AACGAAGTTGATTTCAAAAAGGCATTTGAAATAATTCCTTACCTTCCCAACAACGATGCG
ATGGAAACAGAGGAGGTTGATATGCTCGTTGATATTTTGCCCGATGTTGAAAATTTGTTG
AGAAGGGAAGAACTTAGTGATTTACGACACGATTCTTCGTTTGAATATCTGCTTCGAGCA
AGTTTTGAACAAGTTTTACGAATGCAGATTACATCCGCTGCCTGA

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[65-430] 2.6E-55
PANTHER
Nup133-like (IPR037624) - T[76-582] 5.0E-145 - T[577-829] 5.0E-145 - T[831-902] 5.0E-145
Pfam
Nucleoporin_Nup133/Nup155_C (IPR007187) - T[578-831] 1.7E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NU133_HUMAN 29.114 % 196 1.8E-51