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TRANSCRIPT CARD

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  1. Clone 'cslv002n18'
  2. Clone 'cien45068'
  3. Region 'REG00001550'
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S181.g04870.02.t

Possible name(s)

NUP133

Location

S181 [37,248 / 46,607]

Sequences

Amino acid sequence

Length: 796

>Phmamm.CG.MTP2014.S181.g04870.02.p
WPLDITYASRNGQSVLLVAVLDTSDGSSQLHYAACIISDLHNIANVDVVAFEFSSPFDQK
KIDNTLLSFKIVVEDPNYHTVQHIAMWSSERLIVKALMCDDVSKSEDNVPFNIGGDRLLG
GGDCGGKYVFLSAANGLVTCSTSLQSRLPPSMEESILNNSSSVLQTPDTSLLQSIPGTPV
LTQAKMEQLESSDNCAQRLQAAFLHYCRHNLKQAQSLMAEAFPSGRQNTALDNAVAVVSC
DLLDDYPASDPRWAESVPHDVSSEYGGSSGSLILQHQLEDKQSAHGMFLKFLSEVGVWDS
LHQFPNGKEKIATKWLLCEHSEKLCASISLARKHPTHQGIVDAAIRRALKARGKIGNVGG
LTHKDFFYREVSRIEEIFEHLIEEELKGVMNSSLSTKERVTIICGVNAVFETMLTSARNY
RRSKTLVYEQAGEQGEILPWTVGAGRMNVRNLIIQQHKITVDHGLPEAEDSQQRTVLHQS
LSTLADLVLDGYEEQLKSLAQNRQRWAEVNAAYERHRFQLIEPLLLNGQREKATTLAEKY
KDFPTLVRVCDDTKDHSKAQEYMNKFASQGFSEFLFKWYLDRHEYRKLLACCGDDATERH
HDQLTSFLTAHPKLAWMHQVRRGKYLDAHNTLRHLASMETESCATKKSYLSLGKLATVFS
GQSDAIINEKVEEVNQEHLLLQYQETLPSVVLENLNTDPDTMSVFSPSKLIQLYVGEDNI
FSNEVDFKKAFEIIPYLPNNDAMETEEDSKSNDADWWKLFIWCRAILKDSWKDIDAASNP
FETCSHTVLFKLLKLT

Nucleotide sequence

Length: 2,389

>Phmamm.CG.MTP2014.S181.g04870.02.t
GTGGCCCCTTGACATAACATATGCTTCACGCAATGGACAAAGTGTGTTGCTTGTTGCTGT
GCTTGACACATCCGATGGATCATCTCAACTTCACTATGCTGCCTGTATTATATCAGATCT
TCACAACATTGCCAACGTTGATGTTGTTGCCTTTGAATTTTCTTCACCATTTGATCAGAA
AAAAATAGACAACACCCTGCTATCATTCAAAATAGTGGTTGAAGACCCCAACTACCACAC
TGTACAGCACATTGCGATGTGGTCGAGTGAAAGACTGATTGTGAAGGCTTTGATGTGTGA
TGATGTTTCAAAGTCAGAAGACAATGTGCCATTTAACATTGGAGGTGACCGACTTTTGGG
TGGAGGGGATTGTGGTGGAAAGTATGTCTTCCTCAGCGCTGCCAACGGTCTGGTCACGTG
TTCAACTTCTTTGCAAAGCCGACTCCCACCTTCCATGGAGGAATCAATTTTGAACAACTC
AAGTTCCGTGTTACAGACTCCTGACACATCGCTGCTCCAAAGCATTCCAGGTACCCCAGT
TTTGACTCAAGCCAAGATGGAACAATTGGAATCGAGTGATAACTGCGCACAACGCTTGCA
GGCTGCTTTCCTTCACTATTGCCGACATAACTTGAAACAAGCGCAGAGCTTGATGGCAGA
GGCGTTTCCCTCTGGTCGACAGAACACTGCCTTGGATAACGCTGTAGCAGTTGTTAGTTG
TGACCTTTTGGACGACTACCCTGCCTCAGATCCTCGTTGGGCCGAGTCAGTGCCGCATGA
CGTATCTTCGGAATATGGCGGCTCATCGGGTTCTCTTATACTTCAGCACCAGCTCGAAGA
TAAACAAAGCGCTCATGGGATGTTCCTTAAATTCCTTTCAGAAGTGGGCGTTTGGGATTC
GCTTCATCAGTTTCCTAACGGCAAAGAGAAGATCGCCACCAAGTGGCTGCTGTGCGAGCA
CTCGGAGAAACTTTGTGCGTCGATCAGCCTTGCTCGCAAACATCCAACCCACCAAGGTAT
TGTTGACGCGGCGATTCGAAGAGCCCTAAAGGCAAGGGGCAAAATCGGAAACGTGGGAGG
ATTAACCCATAAAGACTTCTTCTACAGAGAGGTATCACGAATTGAGGAAATATTTGAGCA
TTTGATAGAAGAAGAGTTAAAGGGCGTCATGAACAGTAGCTTGTCCACTAAGGAGCGAGT
TACAATCATTTGTGGAGTGAACGCAGTGTTTGAGACAATGCTCACAAGTGCCCGCAACTA
CCGGCGATCAAAGACACTAGTGTACGAACAGGCTGGAGAACAAGGCGAGATTCTCCCTTG
GACGGTCGGGGCTGGCAGAATGAACGTCCGGAATCTCATTATTCAACAGCACAAAATAAC
AGTCGATCATGGGCTTCCTGAAGCAGAAGACAGTCAGCAAAGGACGGTTCTTCATCAGTC
ACTCTCCACACTTGCTGATCTTGTGTTGGATGGATACGAAGAACAATTAAAATCACTTGC
GCAAAACAGACAGCGCTGGGCTGAGGTCAACGCAGCTTATGAGAGACACCGATTTCAGTT
AATTGAACCACTACTTCTCAACGGTCAGCGGGAAAAAGCGACCACTTTGGCTGAAAAATA
TAAGGACTTTCCCACATTAGTGCGGGTGTGTGATGATACGAAAGATCACTCGAAAGCACA
GGAATACATGAACAAGTTTGCATCACAAGGATTTTCGGAGTTCTTGTTTAAATGGTATCT
TGACCGTCACGAGTACCGAAAATTGTTGGCGTGCTGTGGTGATGACGCAACAGAACGTCA
CCATGATCAACTGACGTCATTTCTTACAGCTCATCCGAAACTTGCGTGGATGCACCAAGT
TAGAAGAGGCAAATATTTGGATGCACACAACACATTACGTCATCTTGCTTCCATGGAAAC
CGAGTCGTGCGCCACAAAAAAATCCTATTTAAGTTTGGGAAAACTTGCTACTGTTTTCTC
AGGCCAATCAGATGCAATAATAAATGAAAAGGTCGAAGAGGTAAACCAGGAACATTTGTT
ATTACAATACCAAGAAACGCTTCCATCGGTGGTGCTAGAAAATCTCAACACAGACCCTGA
TACGATGTCGGTGTTTTCCCCAAGCAAACTAATACAGCTCTATGTTGGTGAAGACAATAT
ATTTTCGAACGAAGTTGATTTCAAAAAGGCATTTGAAATAATTCCTTACCTTCCCAACAA
CGATGCGATGGAAACAGAGGAGGATAGCAAATCAAATGACGCTGATTGGTGGAAATTGTT
CATCTGGTGTAGAGCGATATTAAAAGATAGTTGGAAGGATATTGACGCTGCTTCGAACCC
GTTTGAAACTTGCAGCCATACCGTGCTGTTTAAACTGCTGAAGCTCACC

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-143] 5.7E-12
PANTHER
Nup133-like (IPR037624) - T[10-795] 1.9E-177
Pfam
Nucleoporin_Nup133/Nup155_C (IPR007187) - T[273-695] 4.2E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NU133_HUMAN 35.634 % 432 1.97E-136