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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'KH2012:KH.C5.254.v3....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  4. Transcript 'Moocci.CG.ELv1_2.S34...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1821.g15711.01.t

Possible name(s)

FIBCD1; TNR; TNXB

Gene model

Phmamm.CG.MTP2014.S1821.g15711

Location

S1821 [1,372 / 3,600]

Sequences

Amino acid sequence

Length: 231

>Phmamm.CG.MTP2014.S1821.g15711.01.p
MLLQLAAILFYYTTLVNGQNQCSYVTVPVCGDDVTLTPGSLVGGMSQKGDAGPPGKLGPR
GLPGMKGDKGAAGAKGESSEMAEFKQEVRERLRGLHEIHRMTSGRNCRLRIDLKGFDDSE
AFAQYDSFAIDDESDNYRLHVSGYSGTAGDSLNKRHNGMQFSTQDRDNDASSDSCVLLWG
NSGGWWFDNCFYSKLNSEWGRSQGHNHNMIWYDWKGWDEAIKESTMKIRCD

Nucleotide sequence

Length: 696

>Phmamm.CG.MTP2014.S1821.g15711.01.t
ATGTTGTTGCAATTGGCGGCAATTTTGTTCTATTACACTACGCTGGTCAACGGACAGAAT
CAGTGTAGTTACGTCACTGTTCCAGTGTGCGGTGATGACGTCACTCTCACGCCCGGGAGC
TTGGTAGGTGGGATGAGCCAAAAGGGCGACGCTGGGCCCCCAGGAAAACTGGGCCCAAGG
GGATTACCCGGAATGAAAGGTGATAAGGGAGCTGCTGGAGCAAAAGGTGAATCGTCTGAG
ATGGCAGAATTCAAACAGGAAGTGAGAGAAAGACTGCGAGGTTTGCACGAAATACACAGG
ATGACAAGCGGGCGGAATTGCAGATTGAGAATTGATTTAAAAGGATTTGATGACTCTGAA
GCCTTCGCACAATACGATTCGTTTGCAATCGACGACGAATCCGACAATTATCGTTTACAT
GTTTCTGGATACAGTGGAACGGCTGGTGACAGTCTTAATAAGAGGCACAACGGGATGCAA
TTCTCCACTCAAGACCGGGATAATGATGCATCTTCAGACAGCTGCGTACTTCTTTGGGGA
AACTCTGGTGGGTGGTGGTTTGACAATTGTTTCTATTCTAAACTTAACTCTGAATGGGGA
AGATCCCAGGGCCACAACCACAACATGATCTGGTATGACTGGAAAGGGTGGGATGAAGCG
ATTAAAGAATCAACAATGAAGATCAGATGTGACTAA

InterProScan

SMART
Fibrinogen_a/b/g_C_dom (IPR002181) - T[36-231] 1.1E-16
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[88-229] 1.96E-40
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[90-229] 1.8E-36
ProSiteProfiles
Fibrinogen_a/b/g_C_dom (IPR002181) - T[94-231] 29.788

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TENR_HUMAN 41.912 % 113 8.21E-29
TENX_HUMAN 39.706 % 110 1.53E-27
FBCD1_HUMAN 41.958 % 111 1.94E-28