- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S183.g04922.01.t
Possible name(s)
EDIL3; MFGE8; RS1
Gene model
Location
S183 [128,344 / 129,765]
Amino acid sequence
Length: 177
>Phmamm.CG.MTP2014.S183.g04922.01.p
MYKERLGEFPKLNLEANRDTLCKLGLQTGFIPDSAITGSSYWDSAQDEKHVPSHGRLDRA
GHPSGTLVGAWVALNQVAGEWIQVEVQKPTTITGVITQGRNYGAMWVTKFKVEYKTKIHE
SWTEIRNKDLQNEFWGNSDENTKVMNMFENPVEAIQIRIVVVSWNNFIALRHEYLTC
Nucleotide sequence
Length: 534
>Phmamm.CG.MTP2014.S183.g04922.01.t
ATGTATAAAGAACGACTTGGAGAGTTTCCAAAACTAAACCTGGAGGCCAACAGAGATACT
CTTTGCAAGTTGGGACTGCAGACGGGTTTTATACCAGACAGCGCAATTACCGGATCATCC
TACTGGGATTCTGCCCAGGACGAAAAACATGTTCCAAGCCACGGTAGACTGGATCGCGCT
GGACATCCGAGTGGAACGTTGGTTGGGGCATGGGTTGCCTTAAATCAGGTAGCTGGTGAA
TGGATTCAAGTCGAAGTACAGAAGCCGACCACCATTACCGGTGTTATAACTCAAGGTAGA
AATTATGGTGCGATGTGGGTGACCAAATTTAAAGTGGAATACAAAACTAAAATTCATGAA
AGTTGGACGGAGATACGTAATAAAGATTTACAAAATGAGTTTTGGGGAAACAGCGACGAA
AATACAAAAGTAATGAACATGTTTGAGAACCCGGTTGAAGCAATTCAAATACGTATAGTG
GTTGTGAGTTGGAATAATTTTATTGCCTTGCGACATGAATACTTAACTTGTTGA
| ProSiteProfiles |
FA58C (IPR000421) - T[19-177] 30.512 |
| SMART |
FA58C (IPR000421) - T[21-177] 4.9E-9 |
| Gene3D |
Galactose-bd-like_sf (IPR008979) - T[22-177] 3.7E-41 |
| CDD |
FA58C (IPR000421) - T[23-173] 5.45908E-35 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[23-177] 9.22E-34 |
| Pfam |
FA58C (IPR000421) - T[36-173] 1.7E-24 |
| ProSitePatterns |
FA58C (IPR000421) - T[70-99] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MFGM_HUMAN | 37.5 % | 90.5 | 8.32E-22 |
| EDIL3_HUMAN | 33.75 % | 80.5 | 3.84E-18 |
| XLRS1_HUMAN | 29.936 % | 78.2 | 3.53E-18 |