- Clone 'cien88180' >
- Transcript 'Moocci.CG.ELv1_2.S16...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1845.g15760.01.t
Possible name(s)
AMY1A; AMY1B; AMY1C
Gene model
Location
S1845 [534 / 7,016]
Amino acid sequence
Length: 478
>Phmamm.CG.MTP2014.S1845.g15760.01.p
MWAGVQISPPSENRIVDSRPWWERYQPISYVLSTRSGDRGALQNMVDRCNAVGVKIYADI
VINHMCGGGGTGTGTGGTYFDANTEDFPGVPYSAMDFNDGNCYTSSGNIENYQDANQVRN
CRLVNLLDLNQGKDYVRGKIIDFMNDLTSLGIAGFRVDACKHMWPGDLDAIFSSLNNLPG
TSSKPFIYSEVIDQGGEPITASEYYYLGRVTEFKYGINLGNNKDAVQNLGNFGEAWGMMP
DGNALVFLNNHDNQRGHGGDLKIFSAYMMAWPYGVPRVMSSYYFDNSDQGPPANQRSINA
DGSCGNGWVCEHRWRQIKNMAAFAAAAAGQPVSNWWQGNNQIAFSRGNKAFLAINKDYGT
MSGTFQTGMPAGEYCNVNSGDFVNNACSGPPANQRSINADGSCGNGWVCEHRWRQIKNMA
AFAAAASGSCVSVDGNGYASLNIPQSDDPVVAIHVNAPCNCPTGDCSSSTAPPTGGGK
Nucleotide sequence
Length: 1,437
>Phmamm.CG.MTP2014.S1845.g15760.01.t
ATGTGGGCTGGTGTACAGATATCGCCACCTAGCGAGAACCGCATCGTGGATAGCCGTCCC
TGGTGGGAAAGATACCAGCCTATCTCATATGTTCTGAGCACAAGATCTGGAGACAGGGGA
GCCCTTCAGAACATGGTGGATCGTTGCAATGCGGTTGGAGTAAAGATCTATGCCGATATT
GTTATTAACCACATGTGTGGTGGCGGGGGCACTGGTACAGGAACTGGAGGAACTTATTTC
GATGCGAACACCGAAGACTTTCCTGGAGTTCCATACTCCGCCATGGATTTCAACGACGGA
AATTGTTACACCTCGTCTGGTAACATTGAAAACTATCAAGACGCCAACCAAGTGCGAAAC
TGTCGCCTTGTCAACCTTCTTGATCTTAACCAAGGCAAAGATTACGTCAGAGGCAAGATT
ATTGATTTCATGAACGACCTTACATCACTGGGCATCGCTGGTTTCCGTGTGGATGCTTGC
AAACACATGTGGCCAGGTGATCTGGACGCAATTTTTAGCTCCCTCAATAACTTGCCTGGT
ACAAGTTCAAAGCCTTTTATATATTCGGAGGTCATCGACCAAGGAGGCGAGCCGATCACA
GCATCTGAATATTACTATCTCGGGAGAGTAACAGAGTTTAAATACGGAATCAATTTGGGC
AACAACAAAGACGCGGTTCAGAACCTCGGTAACTTTGGCGAGGCATGGGGCATGATGCCC
GATGGAAACGCTCTGGTCTTCCTCAATAACCATGACAACCAGAGGGGTCACGGTGGAGAC
CTTAAGATCTTCTCTGCTTACATGATGGCCTGGCCGTATGGAGTTCCTAGAGTGATGTCC
AGCTATTACTTTGACAATTCGGATCAAGGTCCTCCTGCCAACCAGCGAAGCATAAATGCT
GACGGGAGTTGTGGCAACGGATGGGTTTGTGAACACAGATGGAGGCAAATCAAGAACATG
GCTGCATTTGCTGCCGCTGCTGCAGGCCAACCTGTAAGTAACTGGTGGCAAGGTAACAAC
CAAATTGCATTTTCCCGTGGAAACAAGGCTTTCCTCGCCATCAACAAGGATTATGGAACA
ATGAGTGGAACTTTCCAGACCGGAATGCCAGCTGGAGAATATTGCAATGTTAACTCTGGG
GATTTTGTCAACAACGCATGCTCAGGTCCTCCTGCCAACCAGCGAAGCATAAATGCTGAC
GGGAGTTGTGGCAATGGATGGGTTTGCGAACACAGATGGAGGCAAATCAAGAACATGGCT
GCCTTTGCTGCCGCTGCTTCAGGATCCTGCGTGAGCGTAGACGGTAACGGCTACGCATCA
TTGAACATCCCACAATCGGATGATCCAGTCGTGGCCATTCATGTTAACGCTCCTTGCAAC
TGCCCAACCGGAGATTGTTCGTCCAGCACTGCACCGCCCACTGGCGGAGGTAAATAG
| SMART |
Glyco_hydro_13_cat_dom (IPR006047) - T[1-324] 1.5E-49 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[4-323] 2.25E-79 |
| PRINTS |
Alpha_amylase (IPR006046) - T[21-38] 1.0E-30 - T[53-64] 1.0E-30 - T[152-163] 1.0E-30 - T[186-204] 1.0E-30 - T[242-254] 1.0E-30 |
| Pfam |
Glyco_hydro_13_cat_dom (IPR006047) - T[36-255] 2.3E-9 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[330-404] 5.4E-22 |
| SMART |
A-amylase_C (IPR031319) - T[333-458] 1.1E-28 |
| Pfam |
A-amylase/branching_C (IPR006048) - T[337-396] 5.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AMYP_HUMAN | 53.052 % | 433 | 1.78E-148 |
| AMY1_HUMAN | 53.991 % | 441 | 1.7E-151 |
| AMY2B_HUMAN | 53.521 % | 434 | 4.47E-149 |