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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.959.v1....' > 
  2. Transcript 'Harore.CG.MTP2014.S4...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  4. Transcript 'Moocci.CG.ELv1_2.S63...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1858.g15787.01.t

Possible name(s)

NLRP14; RNH1

Gene model

Phmamm.CG.MTP2014.S1858.g15787

Location

S1858 [4,995 / 13,355]

Sequences

Amino acid sequence

Length: 583

>Phmamm.CG.MTP2014.S1858.g15787.01.p
MPLNEFKSFLENAFESGDLENVVKFCFGICKDSVFAEARRLFPSAQVSEIEKKKMFLGLI
AKSKAKKLSKSVRKIDGKHDMQKWFHLFACLNELGSDDISLPVTKLLPTVADIGGSVFSS
DITNMASLYKLNNTTLNLHHVSLSFVGNALRGFGKFVQEHRVKIDKFFLKHCPDEQLQFA
GSFLPHVEIFVVSPLFASLRDSTDRGRKNALTLARSIKDGLLQIDHSHQKKNLVLTGIQF
GDEGVSILSSGVGKVAELYMNRVGMTSVSAIKLGEHLEMETTQSMVRLNISGNKVGDIGA
CAITKSIHKMKRLEMENCGITCKGMPGITQTILNSQNKIPHLDLSHNKFGDDGAQELGKC
LHLAEELKLGGCDVTSIGADALAGGLSKLQTPMDKLDLGANPIGDLGAAAMSKCLSNVKS
LGLGRGRYADRGCGITSDGISHITSGFNHSKAVFSMNSLDLSCNKFGDDGAKKLSKCLHQ
VKSLHLLRCRITSTGMKSLDLSYNEFGDDGAKKLPECLHQVKRLNLRECGITSTGIKALV
GGLSTLQTPTEMLRLDKQLESCIDADDLKILESKVEKLKWGAW

Nucleotide sequence

Length: 1,752

>Phmamm.CG.MTP2014.S1858.g15787.01.t
ATGCCTCTAAATGAGTTTAAATCTTTCCTTGAAAATGCCTTTGAGTCTGGAGATTTAGAA
AATGTTGTAAAGTTTTGTTTCGGCATTTGCAAAGATAGTGTGTTTGCAGAAGCCAGACGA
CTTTTTCCTTCAGCACAAGTTAGTGAAATAGAAAAGAAGAAAATGTTTCTTGGTTTAATT
GCTAAATCCAAAGCAAAAAAACTGTCAAAGAGTGTGAGGAAAATTGATGGAAAACATGAC
ATGCAAAAGTGGTTTCATCTTTTTGCATGTTTGAATGAACTCGGCAGTGATGATATTAGC
TTACCTGTGACCAAACTTCTACCAACAGTTGCTGACATAGGTGGTTCTGTATTTTCATCT
GATATCACAAACATGGCTTCACTTTACAAACTGAACAATACCACTCTGAATTTGCACCAT
GTCAGTCTGTCATTTGTTGGAAATGCTTTGCGGGGTTTTGGAAAATTTGTGCAAGAACAC
CGAGTTAAAATTGATAAATTCTTCTTGAAACATTGTCCTGATGAACAACTGCAGTTTGCT
GGAAGCTTCCTTCCTCATGTGGAGATATTTGTTGTTAGTCCATTATTTGCTTCCCTTCGT
GATTCAACAGACAGGGGCAGAAAGAATGCATTAACATTGGCCAGAAGCATTAAAGATGGA
CTTCTGCAAATTGATCACTCACATCAGAAGAAGAATTTGGTTTTGACTGGCATACAATTT
GGAGATGAAGGTGTGAGCATACTAAGCAGTGGAGTGGGCAAAGTAGCTGAACTTTATATG
AACCGTGTTGGCATGACATCAGTTAGTGCTATTAAGTTGGGTGAACATCTTGAGATGGAA
ACTACACAGTCCATGGTTAGATTGAATATCAGTGGCAATAAGGTGGGTGACATTGGAGCT
TGTGCAATTACCAAGTCAATCCATAAAATGAAAAGACTTGAAATGGAAAACTGTGGAATC
ACATGTAAAGGAATGCCAGGCATCACTCAAACCATCCTAAACTCTCAAAATAAGATTCCC
CACTTGGATTTGTCACACAATAAGTTTGGTGATGATGGTGCCCAGGAACTCGGAAAATGT
TTGCATCTGGCGGAGGAGCTTAAATTGGGGGGTTGTGATGTCACTTCTATTGGTGCAGAT
GCATTGGCTGGTGGATTATCAAAGTTACAGACACCAATGGATAAACTTGATCTTGGTGCC
AACCCAATTGGTGACCTAGGTGCTGCAGCAATGTCAAAATGTTTGAGCAATGTCAAGTCA
CTTGGTTTGGGTCGTGGCAGATATGCTGACCGTGGTTGTGGAATAACATCGGATGGAATT
TCTCATATCACTTCAGGTTTTAACCATTCCAAAGCAGTGTTTAGTATGAACAGCTTGGAC
TTGTCATGCAACAAGTTTGGTGATGATGGGGCAAAGAAGCTTTCCAAATGTTTGCATCAA
GTGAAGAGTCTTCACTTGCTTAGATGTAGAATCACATCCACTGGAATGAAGAGCTTGGAT
TTGTCATACAACGAGTTTGGTGATGATGGGGCAAAGAAGCTTCCCGAATGTTTGCATCAA
GTGAAAAGACTTAACTTGCGTGAATGTGGAATCACATCCACTGGAATAAAAGCATTGGTT
GGTGGATTGTCAACACTACAAACACCAACGGAAATGCTTAGACTTGATAAACAGCTGGAG
AGTTGCATTGATGCAGATGATTTGAAAATCCTGGAGTCAAAAGTAGAGAAACTTAAATGG
GGTGCATGGTAA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[224-578] 1.4E-55
Pfam
Leu-rich_rpt (IPR001611) - T[283-300] 0.38 - T[341-357] 0.0025 - T[455-475] 1.0E-4 - T[494-514] 1.8E-4 - T[521-539] 0.26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NAL14_HUMAN 28.378 % 87 1.15E-17