- Transcript 'Phmamm.CG.MTP2014.S2...' >
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Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S185.g04970.02.t
Possible name(s)
NKX2-3; NKX2-5; NKX2-6
Gene model
Location
S185 [129,837 / 131,061]
Amino acid sequence
Length: 323
>Phmamm.CG.MTP2014.S185.g04970.02.p
MQLLHSTRLELASLVPAAPFRSLYNAGQCKEFAPQCDESDLVMRFCFADETCYLRYSEKS
DNFSESNCSGSPEESDKKKGDEDGMKARHRTRRKPRVLFSQAQVFELERRFKQQRYLSAP
EREHLAQILKLTSTQVKIWFQNRRYKCKRMRQDKTLELASIGPPRRVAVPVLVRDGKPCL
GGPGAGIQNSHAPYSAPYNVTVTPYHNYPNSYNSCGYNSYSHPNPNAYAPGAAAAAAVAG
AAAAAYGTAVSAGYNGLSGPGMSGGQGGPMAGYPTPTLHPQHPNPVAMGSSPFGTSTMSP
GQVGQPGLHPTPSDYMYKLGLCT
Nucleotide sequence
Length: 972
>Phmamm.CG.MTP2014.S185.g04970.02.t
ATGCAGCTCCTGCATTCGACGCGCCTCGAGCTGGCCTCGCTGGTCCCAGCGGCGCCATTC
CGATCGCTTTACAATGCGGGGCAGTGTAAAGAATTCGCGCCGCAATGCGATGAATCAGAT
TTGGTGATGAGATTTTGCTTTGCCGACGAGACGTGTTACTTGCGATACTCTGAAAAGTCA
GACAACTTCTCGGAGAGCAACTGCAGCGGAAGTCCGGAAGAGAGTGACAAAAAGAAGGGT
GACGAGGATGGAATGAAGGCACGACACCGCACACGCCGTAAGCCACGAGTTCTATTCTCA
CAAGCCCAAGTCTTTGAGCTGGAGCGCCGATTTAAGCAGCAACGCTATCTCTCAGCACCC
GAGCGCGAACATCTTGCTCAGATCTTAAAACTCACATCAACACAAGTAAAGATTTGGTTC
CAAAACAGACGGTACAAATGCAAAAGAATGCGACAGGACAAGACCTTGGAATTGGCAAGC
ATTGGACCACCACGACGAGTTGCTGTCCCTGTGCTTGTGAGAGATGGGAAACCGTGTCTT
GGTGGTCCCGGAGCGGGAATTCAAAACTCACATGCCCCATACTCCGCGCCGTACAACGTC
ACAGTCACCCCGTACCACAATTACCCTAACTCGTACAACTCGTGCGGATACAACTCGTAT
TCGCACCCGAACCCCAACGCTTACGCTCCAGGTGCCGCAGCTGCTGCAGCAGTAGCCGGA
GCCGCTGCCGCCGCTTATGGAACCGCAGTATCTGCCGGTTATAATGGATTATCGGGTCCG
GGTATGTCAGGGGGACAGGGTGGTCCTATGGCGGGGTATCCCACACCAACCCTTCACCCG
CAACATCCAAACCCGGTCGCCATGGGATCATCACCGTTCGGCACATCAACCATGTCTCCT
GGACAGGTTGGTCAACCCGGACTTCATCCCACGCCCAGTGACTACATGTACAAGCTCGGT
TTGTGCACTTGA
| PANTHER |
NKX-2.5 (IPR033629) - T[59-246] 6.3E-77 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[83-151] 8.98E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[90-150] 20.099 |
| SMART |
Homeobox_dom (IPR001356) - T[92-154] 3.0E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[93-151] 7.50805E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[93-149] 1.1E-19 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[114-125] 1.9E-6 - T[129-139] 1.9E-6 - T[139-148] 1.9E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[125-148] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX26_HUMAN | 73.171 % | 171 | 2.47E-51 |
| NKX25_HUMAN | 64.341 % | 157 | 6.95E-46 |
| NKX23_HUMAN | 65.306 % | 156 | 7.78E-45 |