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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S197...' > 
  2. Transcript 'KH2012:KH.L170.28.v5...' > 
  3. EST 'BW407599' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1868.g15805.01.t

Possible name(s)

AC099850.2; SMG8

Gene model

Phmamm.CG.MTP2014.S1868.g15805

Location

S1868 [22,125 / 24,903]

Sequences

Amino acid sequence

Length: 925

>Phmamm.CG.MTP2014.S1868.g15805.01.p
MEEHWKLPYTKELEDAISANEVCVVGVFGKSTWGHTSKGCVINNLTNSASFNPHYPDYLR
KNGVYHTPNVETLIPNIECSFDQQKKVLFLHLTTTYDTAELVRACAMMRNHLDNHSDFHD
FWKNQEVEIAFSLLYLFSVCHVLILVHPVSIFDISYDKLFHHMTNLRTKVLPHIKDVLKG
CSVGRDWWVNGRPCPPRLLFVMQRCHLSNLQVESSGAEHSTKKKKPPLKRLQHTIEDQIY
KILRNSRVLTNSAVNCLFTVPPNQAFVHIMTEQFEKVKTEEDPIRSMLKLLRSSCETHRD
PTARSRAYRLLTNPPTQWRDEEEDEIEDASNPLWAFLSQHTDLLLSKKGFKDSVGRNALP
THFEVPSLKQWLKVANNLYDLFFMKVKKVETVDETKPDINEKILEMRQELHAQIDPESRF
SEARCSKLVSLASAAYQSNLPMHYTSKVHNNQLGQALSTYALHARGPARDKYEACVQAEC
EAFWNDGRRLCEVHSLTGRHCVHRFHDLPTDGKSQPDANPPKMAHSSRSRTIAASSCGRI
QGPRDDPFTLQEANYDFYLRMDVQALPVISDADTFKFPVHERNDKQSMVSPELHCLVEQL
HLGSDSSSSEKDVAARIRHRTVSGESDCQTSTQESDSEEQLDEAKPLPADDRQRTTSANY
EFSLNSETMPEVQSVDYADDMPQKLTYTEGMMHSGLAEDILPLFSSWSLVRLGAFSSYIP
AHGLEMPGFLPGTSFLVPWDISLQGEDTGATHWPVPGEARKLSLKETKLMQQDMTKAYVG
YEYETPRGQRFICSAPDKAVKTSGNGIVRDPIQPLLDMDMPLYCTSPVSARSGKPLLGQL
MRVYVATPPESNAHITLKPKVVPGPSPTPTFYPSQNEFVLRPNSLWVLRFPYVYVSDSGP
HLQPKDLSQLSAWRVLKMISVDIDH

Nucleotide sequence

Length: 2,778

>Phmamm.CG.MTP2014.S1868.g15805.01.t
ATGGAAGAACATTGGAAACTACCTTACACCAAAGAGTTGGAAGATGCTATTTCAGCAAAT
GAAGTCTGTGTAGTTGGCGTGTTTGGAAAAAGTACTTGGGGTCACACTTCAAAAGGATGC
GTTATCAACAACCTAACAAATTCAGCATCCTTCAATCCCCATTATCCAGATTATTTAAGG
AAAAACGGAGTTTATCATACACCCAATGTGGAGACTCTTATTCCCAATATTGAATGCAGC
TTTGACCAACAGAAAAAGGTTTTATTTTTGCATCTAACAACAACCTATGATACAGCAGAA
CTGGTCAGAGCTTGTGCTATGATGAGAAACCACCTCGACAACCACAGTGACTTTCATGAC
TTTTGGAAAAATCAAGAGGTTGAAATTGCTTTTTCACTCTTATACCTTTTCTCTGTGTGT
CATGTTTTGATTTTAGTCCACCCAGTATCAATTTTTGACATCAGCTATGACAAACTGTTT
CACCATATGACCAATTTAAGAACCAAAGTACTTCCACATATAAAAGATGTCCTAAAAGGA
TGCTCAGTTGGTCGAGATTGGTGGGTCAATGGACGGCCCTGCCCCCCAAGACTATTGTTT
GTTATGCAGAGGTGCCATTTATCAAATCTACAAGTGGAAAGTTCCGGTGCAGAACATTCA
ACAAAGAAAAAGAAACCCCCATTGAAAAGGCTACAACACACAATAGAGGATCAAATATAC
AAAATTCTAAGAAACAGTAGAGTTTTAACTAACAGTGCTGTTAATTGTCTTTTCACTGTG
CCACCTAACCAGGCATTTGTTCATATTATGACAGAGCAGTTTGAAAAAGTCAAAACAGAA
GAAGATCCTATTCGAAGCATGCTAAAACTGCTTCGAAGCTCTTGTGAAACTCATCGTGAT
CCAACTGCTCGCTCCAGAGCATATCGCTTGCTTACAAATCCTCCAACACAATGGAGAGAT
GAGGAAGAAGATGAAATTGAAGATGCTTCCAACCCACTGTGGGCCTTTTTATCACAGCAC
ACTGACTTGCTTTTAAGTAAAAAGGGTTTCAAAGATAGTGTGGGTAGAAATGCGTTGCCT
ACACATTTTGAAGTACCAAGCCTGAAGCAATGGTTGAAAGTGGCTAACAACTTGTATGAT
TTGTTTTTCATGAAGGTCAAAAAAGTAGAGACTGTTGATGAAACTAAACCTGACATTAAT
GAGAAAATTTTGGAGATGCGACAGGAACTACATGCTCAAATTGATCCAGAATCCCGGTTT
AGTGAGGCAAGATGTAGTAAGTTGGTTTCCTTGGCCAGTGCAGCTTACCAAAGCAATTTA
CCAATGCACTACACCAGCAAAGTTCACAACAACCAATTGGGACAAGCACTTTCTACCTAT
GCTCTGCATGCAAGAGGCCCTGCCCGGGATAAGTATGAGGCTTGTGTGCAGGCAGAGTGT
GAGGCATTTTGGAATGATGGTCGTCGATTGTGTGAGGTGCATTCTCTAACAGGCCGCCAT
TGTGTTCATCGCTTTCACGATCTACCCACAGATGGGAAATCGCAGCCTGATGCAAACCCG
CCAAAAATGGCCCACTCTTCAAGGTCTCGTACTATTGCTGCAAGCAGTTGTGGCCGAATT
CAGGGTCCCAGGGATGACCCATTTACGCTACAGGAGGCAAACTATGACTTCTACTTAAGG
ATGGATGTTCAGGCTCTCCCAGTTATCTCAGATGCAGATACTTTTAAGTTTCCTGTTCAT
GAAAGAAATGACAAACAGTCTATGGTTTCCCCAGAGCTACATTGCCTTGTTGAGCAGCTG
CATTTAGGTTCTGATTCCAGCTCCAGCGAAAAGGATGTAGCTGCGAGAATTCGCCATAGA
ACTGTAAGTGGGGAAAGTGACTGCCAGACTTCAACACAGGAAAGTGATTCGGAAGAGCAA
CTTGATGAAGCCAAGCCATTGCCTGCTGACGACAGACAACGAACAACATCTGCCAACTAT
GAGTTTAGTTTAAATTCTGAGACAATGCCTGAGGTACAAAGCGTGGATTATGCTGATGAT
ATGCCACAAAAACTGACTTACACAGAAGGGATGATGCATTCAGGGCTTGCTGAGGACATT
TTGCCTCTTTTCTCATCATGGAGTCTTGTTCGCTTGGGGGCATTTTCATCCTACATTCCT
GCTCATGGTTTAGAAATGCCAGGGTTTTTGCCAGGAACAAGTTTTTTAGTGCCATGGGAC
ATTTCATTACAAGGTGAAGACACTGGTGCCACCCACTGGCCAGTCCCAGGCGAAGCTCGT
AAACTGTCATTAAAAGAGACTAAACTAATGCAACAGGATATGACCAAAGCATATGTGGGA
TATGAATATGAGACTCCAAGAGGACAAAGATTTATCTGCTCTGCTCCAGACAAGGCAGTG
AAAACAAGCGGCAATGGAATTGTTAGGGACCCCATACAACCGCTCCTGGATATGGACATG
CCTCTTTATTGTACAAGCCCAGTATCAGCAAGATCTGGAAAACCATTACTCGGACAATTA
ATGAGAGTATATGTCGCCACACCACCTGAAAGTAATGCACATATCACCCTCAAACCTAAA
GTGGTTCCAGGCCCTTCACCAACTCCAACATTTTATCCAAGTCAGAATGAATTTGTTTTG
CGACCTAATTCGTTGTGGGTGCTCCGCTTTCCGTATGTCTATGTTAGTGATTCTGGTCCA
CATTTGCAACCCAAAGATTTAAGCCAACTCAGTGCATGGAGAGTTCTCAAAATGATATCA
GTTGACATTGATCATTAA

InterProScan

PANTHER
SMG8 (IPR028802) - T[15-919] 1.7E-233
Pfam
Smg8/Smg9 (IPR019354) - T[19-917] 1.6E-232

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMG8_HUMAN 38.208 % 619 0