- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1872.g15813.01.t
Possible name(s)
NLRC3; NLRP1; NLRP13
Gene model
Location
S1872 [13,102 / 27,025]
Amino acid sequence
Length: 1,263
>Phmamm.CG.MTP2014.S1872.g15813.01.p
MASFLNASTSGQYLASTSNPNQPFQFQHQEIPLNFHQPQNPTNIPYPNQAVPPPQQTGAR
NQFDAAAVRGNISQSQQFRHHISWNTRPTYSYVNQQHYAAVNPPYIGTQQYIGASGYPPN
YGQNQQFYGIHPSPLYQANNMGQIVYHRFSAIQMQSLQQQQLQQQIQQQLQQQLQQQLQQ
QQQQQQVQQQQQQQQVQQQQQQVQQQVQQQLQKQQQQVQQQLEQQQLPVQAPNMESSGQQ
NAQSNINSASTSDTPESMTNTQQNTIGAAPTTDVRSETDLQPLKKHLKESAEKQCLSKNF
FKLTKQKIEVCRMEITDKPNRKIQPAEYETAKKRAKLAKSSKNWEEEGHYNRRKDYEKID
LKEKNEVSVESLFRLAKQQASKNGEPECQGNVVALIGQPGIGKTTLSKVIAENILQDKME
NITNMDWVFYICVRNINFQKPVTLVDFLFKYSLDVTQYNKLIGAEFPLQETILRQILESK
NVFIAFDGLDEASTEWDLEYKGGLNLHEKNNPLLYLFGLMNGDILPNAKKLFTSRQNHFF
SIKANHRPQFVAEVLGLNIKSQESLCKQICPDHKDEVWKIIKSNPNLSYSCYVPAKCVFI
TFAVWKSLKEDSSERFHSLTHIFAQGFKYYFADGFVKRKVKDEKYMDKIAKLAWNGFDQK
KSVFENEDLDKVGIDIKTFINILSVFTTEENWGMTILDCDRKSSFSHLIWQEYFAACYLV
YFSSVDDFCKLIPQFKSDRWEVVTKFVFGLFNSDVNKVGKSCFFTTNQNEQEFQDKKTEL
LKLACNEMKVRVKNTEDMTRVKLVQVCSWLQEIDDEKIYQEVATFLPLKIYLTGNILLTD
VSSITEVLSFSKTKHDIKISKHCKFPHGSLKEFLENLGKHNIQINLLDLDANKVTDESAC
AIASCIHNIEKLDLESCKLTSVGLWKIAEAISNLPHPIKVLNLRYNQVNDESASAIASCI
HNIEKLDLENCKLTSVGIYKIAEAISNLSQPIKLLNLGLNMVTDEIASAIASCAHNIEEL
DLGKYARCELTSVGICKIAEAISKLSQPIKSLNLRYNQVNDESASAIASCINNIEELNLF
DCQLTSAGICKIAEAISNLSQPIKSLNIYENTIDEKAENSLFGCLHNIQDELIVRKSDTS
PDFESKYSRLPEPTQLQTSDPSAETTWTNWKTSSTNEPQSFTPVVVTNIPILSSSSSLQS
PGKPKNARRRLLQMSDPCSSATPSFVQLLLFNLDFTIYNLRKREGNLFAASQIFNQLLPV
LVS
Nucleotide sequence
Length: 3,792
>Phmamm.CG.MTP2014.S1872.g15813.01.t
ATGGCCTCTTTCCTAAATGCATCAACAAGTGGACAATACTTGGCATCCACCAGCAATCCT
AACCAACCATTCCAATTCCAACACCAAGAAATTCCATTAAACTTCCACCAACCTCAAAAC
CCAACCAATATTCCATATCCCAACCAAGCTGTTCCTCCACCCCAACAAACAGGTGCAAGG
AATCAGTTTGATGCTGCAGCTGTGAGAGGAAATATTTCACAGTCTCAGCAATTTCGACAT
CATATATCATGGAACACTCGTCCCACCTACTCCTATGTCAACCAGCAACATTATGCTGCA
GTGAATCCACCTTATATTGGAACACAACAATATATTGGTGCAAGTGGCTATCCTCCAAAT
TATGGTCAGAACCAGCAATTTTATGGAATCCATCCTTCCCCACTCTACCAAGCCAACAAC
ATGGGTCAGATAGTGTATCATAGATTTTCTGCAATACAGATGCAAAGCTTACAGCAACAA
CAACTCCAACAACAAATCCAACAACAACTGCAACAACAACTCCAACAACAACTGCAACAA
CAGCAACAACAACAGCAGGTGCAACAACAACAACAACAGCAGCAGGTCCAACAACAGCAG
CAGCAGGTCCAACAACAGGTGCAACAACAACTGCAAAAACAACAGCAGCAGGTGCAACAA
CAACTGGAACAGCAACAACTGCCGGTACAAGCCCCAAATATGGAGAGCAGTGGGCAACAG
AACGCCCAGAGTAACATTAATTCTGCTTCAACATCTGACACTCCAGAATCTATGACAAAT
ACACAGCAAAATACAATTGGAGCAGCCCCAACAACTGATGTCAGATCTGAAACAGATTTA
CAACCACTTAAAAAGCATTTAAAAGAGTCAGCTGAAAAGCAATGCTTATCGAAAAACTTT
TTTAAATTAACAAAACAGAAAATTGAGGTTTGTCGGATGGAAATAACAGACAAACCAAAC
AGAAAAATTCAACCAGCAGAATATGAAACAGCTAAGAAACGGGCAAAACTTGCAAAATCA
TCAAAAAACTGGGAAGAGGAGGGACATTACAACAGAAGAAAAGATTATGAGAAGATTGAT
TTGAAAGAGAAAAATGAAGTTTCAGTTGAAAGTTTATTTCGTTTAGCTAAACAGCAAGCA
AGTAAAAATGGTGAACCTGAATGCCAAGGAAATGTGGTTGCCCTAATTGGACAGCCAGGA
ATCGGAAAAACAACACTTTCCAAAGTTATCGCGGAGAATATACTCCAGGATAAGATGGAA
AACATAACAAATATGGATTGGGTATTTTACATTTGTGTCAGAAATATTAACTTTCAAAAA
CCAGTAACACTGGTTGATTTTCTGTTCAAATATTCTTTGGATGTCACCCAATACAACAAG
TTAATTGGTGCAGAATTCCCTTTACAAGAAACAATACTGCGACAAATTTTAGAATCCAAA
AATGTGTTCATTGCTTTTGATGGCCTGGATGAAGCTTCAACAGAATGGGATTTAGAGTAT
AAAGGTGGTTTAAACTTGCATGAAAAAAACAACCCCCTGCTATATTTATTTGGTCTTATG
AATGGAGACATACTACCTAATGCAAAAAAGCTATTTACATCACGACAAAACCATTTTTTC
TCTATTAAGGCAAATCATCGACCCCAATTTGTGGCTGAAGTTTTGGGTTTAAACATAAAA
TCTCAAGAGAGTTTGTGTAAACAGATTTGCCCTGACCATAAAGATGAAGTGTGGAAAATC
ATTAAAAGCAACCCAAACTTATCTTACTCATGTTATGTGCCAGCTAAATGTGTGTTTATT
ACATTTGCTGTTTGGAAAAGTCTTAAGGAGGATTCTAGTGAAAGATTTCACTCCCTTACT
CATATTTTTGCACAAGGATTTAAGTATTATTTTGCTGATGGATTTGTAAAAAGAAAAGTA
AAAGATGAAAAATACATGGATAAAATTGCTAAGTTGGCATGGAATGGATTTGACCAAAAA
AAATCTGTTTTTGAGAACGAAGATCTGGATAAAGTGGGGATTGACATTAAAACATTTATT
AACATTCTTTCAGTTTTTACAACAGAAGAAAATTGGGGAATGACAATTCTTGACTGTGAC
AGAAAGAGCAGCTTTTCACATTTAATTTGGCAAGAGTATTTTGCTGCTTGTTACCTTGTT
TACTTCTCAAGCGTTGATGATTTTTGTAAATTAATTCCTCAGTTTAAAAGTGACAGATGG
GAGGTAGTTACCAAGTTTGTGTTTGGTCTTTTCAACTCTGATGTCAATAAAGTTGGAAAA
AGTTGTTTTTTTACAACAAATCAAAATGAACAAGAATTCCAGGATAAGAAAACTGAATTG
CTTAAACTTGCTTGTAATGAGATGAAAGTGAGGGTTAAAAACACTGAAGACATGACCAGG
GTAAAGCTGGTGCAAGTCTGCTCATGGTTGCAAGAAATTGATGATGAAAAAATTTATCAA
GAAGTTGCCACATTTTTGCCTTTGAAGATATATTTAACTGGAAACATACTTTTGACTGAT
GTGTCAAGCATTACAGAAGTGCTGAGTTTTTCAAAAACCAAGCATGACATCAAGATTTCA
AAACACTGCAAATTTCCTCATGGCAGCCTAAAGGAGTTTTTAGAAAATTTAGGGAAACAC
AACATACAGATTAATTTATTGGATCTTGATGCAAATAAAGTCACTGATGAAAGTGCATGT
GCAATAGCTTCCTGTATTCATAATATTGAGAAACTAGATCTGGAGAGTTGTAAACTGACA
AGTGTTGGACTTTGGAAAATTGCAGAAGCCATTTCCAACCTTCCACATCCAATTAAAGTA
TTGAACCTCAGATATAACCAAGTCAATGATGAAAGTGCATCTGCAATAGCTTCCTGTATT
CATAATATTGAGAAACTAGATCTGGAGAATTGTAAACTGACAAGTGTTGGAATTTACAAA
ATTGCAGAAGCCATTTCCAACCTTTCACAACCAATTAAATTATTGAATCTTGGCCTGAAC
ATGGTTACTGATGAAATTGCATCTGCAATAGCTTCCTGTGCTCATAATATTGAGGAATTG
GATCTAGGGAAATATGCACGTTGTGAACTGACAAGTGTTGGAATTTGTAAAATTGCAGAA
GCCATTTCCAAACTTTCACAACCAATTAAATCATTGAACCTTAGATATAACCAAGTCAAT
GATGAAAGTGCGTCTGCAATAGCTTCCTGTATTAATAATATTGAGGAACTGAATCTGTTT
GATTGTCAACTGACAAGTGCTGGAATTTGTAAAATTGCAGAAGCCATTTCCAACCTTTCA
CAACCAATAAAATCACTTAACATCTATGAAAACACAATTGATGAAAAAGCAGAAAATAGT
TTGTTCGGTTGTTTGCACAACATACAAGATGAACTTATAGTGAGAAAATCAGACACAAGT
CCAGACTTTGAATCAAAATACTCAAGATTACCTGAACCAACACAATTGCAGACATCGGAT
CCAAGTGCTGAAACTACCTGGACCAATTGGAAGACTTCTTCTACTAATGAACCACAATCC
TTCACTCCAGTGGTGGTCACCAACATTCCAATTCTGTCAAGCTCTTCTTCTTTACAGTCT
CCAGGAAAACCTAAAAATGCAAGAAGACGTCTTCTACAAATGTCTGACCCTTGCTCTAGT
GCTACACCAAGCTTCGTTCAGCTCCTGCTCTTCAACTTGGACTTCACCATTTACAATCTC
CGGAAAAGGGAGGGCAACCTATTTGCCGCATCACAGATTTTTAACCAACTCCTGCCAGTT
CTTGTTTCATGA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[388-574] 4.95E-11 |
| ProSiteProfiles |
NACHT_NTPase (IPR007111) - T[391-535] 14.421 |
| Pfam |
NACHT_NTPase (IPR007111) - T[392-564] 1.3E-13 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[777-1149] 2.0E-46 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[938-957] 0.038 - T[1049-1068] 0.013 |
| Protein Name | Identity | Bit Score | e-value |
|---|