- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S188.g05012.01.t
Possible name(s)
FUBP1; FUBP3; NOVA2
Gene model
Location
S188 [51,976 / 65,549]
Amino acid sequence
Length: 428
>Phmamm.CG.MTP2014.S188.g05012.01.p
MAEGIANASGDAQIEINTVDNITSQQEVPHSLLAAPGPMGDAPQKRALEDGEEPGPKKLA
PLPLSVANSVSNNSSVVPGMQAEAGMMSETISLPDDLVGLIIGRGGENIMRMQRETGCRI
QITQSMPGTKERPCTLSGTVEQIDVCRNMLNEIVSRSQAGTLGNNFNLASGGLQGMGDGM
DKSVTIDIPPDKCGLIIGKGGETIKMLQQTLGVKMLLIQESTENLGLAKPLKITGPQINI
DNAVNMIHQMMANRDQQIAQQKMDGNADPSMFGDDANRSFIPVPKAAVGVVIGKGGDMIN
QIQDETGTRIQFKPEEPGLPERMCSVTGRKDGVDAAIRKIHQIIQNVQERDGQRTPPPPP
PPPPPPPPPPPPPPPPPPPPPPPPPPPCWWWCYRWWWWWWWWWWSTWFWSMGRNQSEQRS
KHGWTYHC
Nucleotide sequence
Length: 3,831
>Phmamm.CG.MTP2014.S188.g05012.01.t
AAAAACGCCATTTTTTTACTCTTTAGTGTTCTTTCTGTGAACTTCCTGTGGCGGTTTAGG
CGTGCTCTCCCGCTAAAGCAACAAGAGTTATTTCACTTTAGACTAGTTTTGTAAATGGCC
GAGGGGATTGCTAATGCATCTGGAGACGCTCAAATTGAAATCAACACTGTAGACAACATC
ACTTCACAACAAGAGGTTCCCCACTCACTACTGGCAGCCCCTGGGCCTATGGGAGACGCT
CCACAGAAAAGAGCTTTAGAAGATGGTGAAGAGCCTGGGCCAAAAAAACTAGCTCCTCTT
CCACTTAGTGTTGCTAATTCTGTGTCAAATAATTCTTCTGTTGTCCCTGGAATGCAAGCA
GAGGCTGGCATGATGTCAGAGACCATCAGCCTACCGGATGATCTTGTGGGATTAATTATT
GGTCGTGGAGGTGAAAACATCATGCGAATGCAAAGAGAAACCGGTTGCCGAATTCAAATT
ACGCAAAGTATGCCTGGCACCAAAGAAAGACCATGTACTCTATCTGGCACAGTAGAGCAA
ATTGATGTGTGCAGGAATATGCTGAATGAGATAGTTTCAAGATCACAAGCTGGTACACTT
GGAAATAACTTTAATCTTGCTTCTGGTGGTTTGCAAGGTATGGGCGATGGCATGGACAAG
TCAGTTACTATTGATATTCCTCCTGACAAGTGTGGCCTTATCATTGGAAAGGGTGGAGAG
ACCATTAAAATGTTACAACAAACTTTGGGAGTGAAAATGCTTCTTATTCAAGAATCAACT
GAAAATCTAGGTCTGGCTAAACCGCTGAAGATAACTGGACCACAAATAAATATTGATAAT
GCTGTCAACATGATTCATCAAATGATGGCCAACAGAGACCAGCAAATTGCTCAGCAAAAA
ATGGATGGAAATGCTGATCCATCTATGTTTGGCGATGATGCAAATCGGTCATTCATTCCT
GTTCCAAAAGCTGCTGTGGGAGTTGTGATTGGCAAGGGTGGTGACATGATCAATCAAATT
CAGGATGAAACAGGAACTCGCATACAATTTAAACCCGAGGAGCCTGGACTCCCCGAGCGT
ATGTGCAGTGTGACTGGGAGGAAAGATGGTGTGGATGCTGCCATCAGAAAGATCCACCAA
ATCATACAGAATGTTCAAGAGCGCGATGGTCAAAGAACCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCTGCTGGTGGTGGTGCTATAGGTGGTGGTGGTGGTGGTGGTGGTGG
TGGTGGTCCACCTGGTTTTGGTCAATGGGAAGGAACCAATCAGAACAGAGGTCAAAACAT
GGGTGGACATACCACTGCTGAACATTTGGTTCCAGCAAATCGAACTGGTCTGGTCATCGG
CAAAGGTGGGGAAACCATCAAGCAGATTAACATGCAATCTGGTGCACATGCTGAAATACA
AAGAAATCCACCACCTGGCTCCGATTTGAACTACAAGACGTTTTTGATAAAAGGTACGCA
AGAACAGATCACTGCAGCAAGAAGACTTATTCAAGAAAAAGTTGATGCTGGTCCTGGAGG
AACTACTAATAATCAAGGATACCGTGGTCAAATTGGAGGTGGTCCCCCTGGCCAACCCCC
ACCCAGTGCCTATGCTCAGCCTCCCCCACAGCAGCAGGCATATGGCGGACTCCCCCCTGC
AAGCTACCCGGCCCAGACCCAGCTGCAAGCCCCACCACAAGCACAACCAGCACCACAATC
ATTCCAGCAGCAACAGCCATGGGGAGGACAGTTTCAACAGTGGAACCCACCAACTGCTAC
AACACCCCAGCAGAATGGAACTGAATTGGGCAAACCTGTGGCTGATAGTAATGCTGCAGC
CTGGCAGTCATATCTTCAGTTATATGGTCAAGCGCAAGCTATTCAGCAACCTGCAGCTTC
CGCTGCAACTGCTGTTGCTGCTGCCAGTCAACCAGATTACACCAAGCAATGGGATGAGTA
CTTAAAACAAACAGGTGCTGTTGCAGCAGCAGCTGCTGTAGCTGCTCCTAATGCTCAAGC
CATTCAACAACCTGCACCTAATGCTGCTCCAGCTGCACAACCAGCAACAACCCAGGCTAC
CACCGATTATTCTGCTGCATGGGCTGAATACTACAGACAGTATTATGCTATGCATGGACA
GCAGTATGCAGCCGCTGCTGCAGCTGCTGGGGCTCCTGCTCAGACTTAAAATTAAAGTCA
GTTTTTTGTAAATAGATGACGATGGACGAAGATTGGCAAGCGGCAACTGCCAAGAGGCAG
CGACGTGGTTTGTATATTACTTGCCTTCGGTGCTAGTAAACTTGCAGCTGCATGTACATA
TTGTTTACACACCCAAGTAAGCCCCAAGCCAGCATATACCCAAGATAACAACGTGCTTGT
CCGTTCTGTTTTTTGTGTTGTATTGTGGAGGTAGCATGTAGAAAAATATCCTTAATTAAT
GTTGCCAGCTTTATTAACTTTTCCCGCTATAATTTAGCCGCAAAGTTTAAACCGTATTTC
CCCCATGCAATCGGCGCATATTGTTTTCAATGCCTTGTGCATTTTTCCCGAGTAGCCAAT
TGCGACGCGGTTTCCCGCTTGTTGCGCGCCACATCCCTTCTATTCTTCATAGCGGCGTCC
TCATCGACAGCCCACAGTCGTAGTTTGCTATTTTCGTCGCGTTTTTGAAACCAGTGACCG
CCAAATATTTGCGAATATATGTTTTAAAGTAGCACCGCTCTCGAGTAAATCCCGTTTTAG
TTACCCTGATGCGTCATCGCCTTTTAACAATTGCGTTCAAGTCTCGAATTTTTGTCTCAT
TTCAGTGTTCATTGTCCACTTTCGGCGCACGTTGTTTTCAATCATCGTTTAACTGTGTCG
CTGTTCTCGCTTATGCAACCAACCGTCACAATAAAAGTTGCGCGCAAAGTTTTACAAGCA
ACGCCTTCTTCGTCGCCATGAGTTCGTGCTCGCATGTGGTTTACGCCCCTAGTATCCGTT
GCTGATTACAAACACTCGACTAACCATTTTATTCCTGCGACCGCGTTTCGTATTTTTTTT
TTCTACTAATGTCGTTTGCGTCGGTAAATCTCTCGCGTCTGCTCGAGTTGCAAAACGTCT
GCTCTCTACCTACCCCGTGCACCGACCTATTGTTTCCAACGAGTTGTGTCGCCGCGCTCT
GATCGTCGCTTTAATTTTCCATCGACAATATGTAGCTGCAGTTTAAAACAGCGTGCCACT
GTGACCAACCTCGCCAAGTCCTCCCATATTTTTAGCGAACGCCGTTTTCACTTCGTTAGT
TCTTTTGGTTGTAATTTCCGTTTCGGTTAAACCATACCCGTCATCTTTTATTGAGTCGAT
TGCCTTGTTTTAGTTTTGATCGTTTGCACGATATCGTGAACCGTTGTCTCGTAGATCCGC
TGTGCACGCTAGCGACGACGTCGACAAGCGGGTTACTAACTCGCGATTGCTGCTCGGGAC
ACCCCCCAACCCCCTATTTTCTTACATATTTTTGCGCAAACCGCCTTTCAATTCACACAT
TTGTAGTTTTCGTTTTCATGCTTAGTTATAATACTGTGGCAAAGCTGCCGCGAATCTCAA
GCCGTTTTACTGTTCGTATGCGTTAAAAAAATAACCTAAATTGTTCAAAAGTGCTTTGTT
TTCGCCCGTATTCTGTACGTGACTAACATGTATAATTATTGCATTTTAAACGTAGTCCGG
AGTTAACTAATTTTGCGTTGGTATTTTCTGTTACAATGTACAAATAAAAAG
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[73-160] 8.0E-24 - T[172-274] 1.1E-18 - T[275-368] 7.4E-24 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[83-156] 1.75E-18 - T[180-258] 8.91E-15 - T[281-362] 7.16E-19 |
| SMART |
KH_dom (IPR004087) - T[85-155] 4.1E-15 - T[180-252] 4.8E-13 - T[275-345] 1.2E-15 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[89-152] 1.5E-17 - T[184-248] 1.1E-12 - T[280-341] 9.6E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 39.744 % | 197 | 1.35E-56 |
| FUBP2_HUMAN | 39.228 % | 201 | 9.45E-58 |
| FUBP3_HUMAN | 35.655 % | 190 | 8.47E-55 |