- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S188.g05012.02.t
Possible name(s)
FUBP1; FUBP3; NOVA2
Gene model
Location
S188 [52,090 / 60,046]
Amino acid sequence
Length: 643
>Phmamm.CG.MTP2014.S188.g05012.02.p
MAEGIANASGDAQIEINTVDNITSQQEVPHSLLAAPGPMGDAPQKRALEDGEEPGPKKLA
PLPLSVANSVSNNSSVVPGMQAEAGMMSETISLPDDLVGLIIGRGGENIMRMQRETGCRI
QITQSMPGTKERPCTLSGTVEQIDVCRNMLNEIVSRSQAGTLGNNFNLASGGLQGMGDGM
DKSVTIDIPPDKCGLIIGKGGETIKMLQQTLGVKMLLIQESTENLGLAKPLKITGPQINI
DNAVNMIHQMMANRDQQIAQQKMDGNADPSMFGDDANRSFIPVPKAAVGVVIGKGGDMIN
QIQDETGTRIQFKPEEPGLPERMCSVTGRKDGVDAAIRKIHQIIQNVQERDGMMGGGGGG
GGGGGGPPGFGQWEGTNQNRGQNMGGHTTAEHLVPANRTGLVIGKGTQEQITAARRLIQE
KVDAGPGGTTNNQGYRGQIGGGPPGQPPPSAYAQPPPQQQAYGGLPPASYPAQTQLQAPP
QAQPAPQSFQQQQPWGGQFQQWNPPTATTPQQNGTELGKPVADSNAAAWQSYLQLYGQAQ
AIQQPAASAATAVAAASQPDYTKQWDEYLKQTGAVAAAAAVAAPNAQAIQQPAPNAAPAA
QPATTQATTDYSAAWAEYYRQYYAMHGQQYAAAAAAAGAPAQT
Nucleotide sequence
Length: 1,932
>Phmamm.CG.MTP2014.S188.g05012.02.t
ATGGCCGAGGGGATTGCTAATGCATCTGGAGACGCTCAAATTGAAATCAACACTGTAGAC
AACATCACTTCACAACAAGAGGTTCCCCACTCACTACTGGCAGCCCCTGGGCCTATGGGA
GACGCTCCACAGAAAAGAGCTTTAGAAGATGGTGAAGAGCCTGGGCCAAAAAAACTAGCT
CCTCTTCCACTTAGTGTTGCTAATTCTGTGTCAAATAATTCTTCTGTTGTCCCTGGAATG
CAAGCAGAGGCTGGCATGATGTCAGAGACCATCAGCCTACCGGATGATCTTGTGGGATTA
ATTATTGGTCGTGGAGGTGAAAACATCATGCGAATGCAAAGAGAAACCGGTTGCCGAATT
CAAATTACGCAAAGTATGCCTGGCACCAAAGAAAGACCATGTACTCTATCTGGCACAGTA
GAGCAAATTGATGTGTGCAGGAATATGCTGAATGAGATAGTTTCAAGATCACAAGCTGGT
ACACTTGGAAATAACTTTAATCTTGCTTCTGGTGGTTTGCAAGGTATGGGCGATGGCATG
GACAAGTCAGTTACTATTGATATTCCTCCTGACAAGTGTGGCCTTATCATTGGAAAGGGT
GGAGAGACCATTAAAATGTTACAACAAACTTTGGGAGTGAAAATGCTTCTTATTCAAGAA
TCAACTGAAAATCTAGGTCTGGCTAAACCGCTGAAGATAACTGGACCACAAATAAATATT
GATAATGCTGTCAACATGATTCATCAAATGATGGCCAACAGAGACCAGCAAATTGCTCAG
CAAAAAATGGATGGAAATGCTGATCCATCTATGTTTGGCGATGATGCAAATCGGTCATTC
ATTCCTGTTCCAAAAGCTGCTGTGGGAGTTGTGATTGGCAAGGGTGGTGACATGATCAAT
CAAATTCAGGATGAAACAGGAACTCGCATACAATTTAAACCCGAGGAGCCTGGACTCCCC
GAGCGTATGTGCAGTGTGACTGGGAGGAAAGATGGTGTGGATGCTGCCATCAGAAAGATC
CACCAAATCATACAGAATGTTCAAGAGCGCGATGGTATGATGGGAGGTGGTGGTGGTGGT
GGTGGTGGTGGTGGTGGTCCACCTGGTTTTGGTCAATGGGAAGGAACCAATCAGAACAGA
GGTCAAAACATGGGTGGACATACCACTGCTGAACATTTGGTTCCAGCAAATCGAACTGGT
CTGGTCATCGGCAAAGGTACGCAAGAACAGATCACTGCAGCAAGAAGACTTATTCAAGAA
AAAGTTGATGCTGGTCCTGGAGGAACTACTAATAATCAAGGATACCGTGGTCAAATTGGA
GGTGGTCCCCCTGGCCAACCCCCACCCAGTGCCTATGCTCAGCCTCCCCCACAGCAGCAG
GCATATGGCGGACTCCCCCCTGCAAGCTACCCGGCCCAGACCCAGCTGCAAGCCCCACCA
CAAGCACAACCAGCACCACAATCATTCCAGCAGCAACAGCCATGGGGAGGACAGTTTCAA
CAGTGGAACCCACCAACTGCTACAACACCCCAGCAGAATGGAACTGAATTGGGCAAACCT
GTGGCTGATAGTAATGCTGCAGCCTGGCAGTCATATCTTCAGTTATATGGTCAAGCGCAA
GCTATTCAGCAACCTGCAGCTTCCGCTGCAACTGCTGTTGCTGCTGCCAGTCAACCAGAT
TACACCAAGCAATGGGATGAGTACTTAAAACAAACAGGTGCTGTTGCAGCAGCAGCTGCT
GTAGCTGCTCCTAATGCTCAAGCCATTCAACAACCTGCACCTAATGCTGCTCCAGCTGCA
CAACCAGCAACAACCCAGGCTACCACCGATTATTCTGCTGCATGGGCTGAATACTACAGA
CAGTATTATGCTATGCATGGACAGCAGTATGCAGCCGCTGCTGCAGCTGCTGGGGCTCCT
GCTCAGACTTAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[74-160] 1.5E-23 - T[172-274] 2.1E-18 - T[275-373] 1.0E-23 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[83-156] 3.21E-18 - T[180-258] 1.75E-14 - T[281-407] 5.55E-19 |
| SMART |
KH_dom (IPR004087) - T[85-155] 4.1E-15 - T[180-252] 4.8E-13 - T[275-345] 1.2E-15 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[89-152] 2.7E-17 - T[184-248] 1.9E-12 - T[280-341] 1.7E-16 |
| Pfam |
FUBP_C (IPR015096) - T[554-581] 3.2E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 38.544 % | 202 | 1.75E-56 |
| FUBP3_HUMAN | 31.571 % | 218 | 6.09E-63 |