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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.49.v2....' > 
  2. Transcript 'KH2012:KH.C10.491.v1...' > 
  3. Transcript 'Cisavi.CG.ENS81.R99....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S193.g05098.02.t

Possible name(s)

SNF8

Gene model

Phmamm.CG.MTP2014.S193.g05098

Location

S193 [51,883 / 53,388]

Sequences

Amino acid sequence

Length: 201

>Phmamm.CG.MTP2014.S193.g05098.02.p
MRRRGVGASAVTKKKLESARYKERGTELAAQQLEQLSSQLETFHTNLEEFAAKHKNEIRK
DPQFRHQFQQMCASIGVDPLASGKGFWSEMLGVGDFYYELGVQAVEICIATRSQNGGILT
MDELHKRLMKTRGRYGQDITQEDIRTAIKKLKVLGTGFALLGSASKQIIQSVPGELNMDH
TAILDLAQQLICYNMVTHCLS

Nucleotide sequence

Length: 774

>Phmamm.CG.MTP2014.S193.g05098.02.t
CGCGGTATGAATAATGAACTGACTCGCACGGTAAACGTATGCTGTTTTAACGAATGAAAC
ACACGAATGAAAATATGGGCCTTGATTCCATTGTTTTATGTCTGGTTTTATTAGCTGCCA
TTGCAACTTGTCTGTTTGCTTGTATCGGTAGGTCCTGCTGATAAAACGTGATGAGGCGGC
GTGGTGTCGGAGCAAGTGCTGTAACAAAAAAGAAGCTTGAAAGTGCCCGCTACAAAGAAC
GTGGTACTGAGTTGGCTGCACAACAGTTGGAACAATTAAGCAGTCAATTAGAAACTTTTC
ACACTAACTTGGAAGAATTTGCTGCCAAGCACAAGAATGAAATTAGAAAAGATCCGCAGT
TCCGGCACCAATTCCAGCAAATGTGTGCATCAATAGGAGTTGACCCATTAGCATCTGGAA
AAGGATTTTGGTCGGAAATGCTTGGTGTTGGAGATTTTTATTATGAACTTGGTGTTCAGG
CAGTTGAAATTTGTATCGCAACACGATCACAAAATGGAGGAATCTTGACAATGGATGAGT
TGCATAAAAGACTTATGAAAACACGGGGAAGGTATGGACAAGATATTACACAAGAGGACA
TCAGGACAGCTATAAAAAAATTGAAGGTACTGGGAACAGGTTTTGCATTACTTGGCTCGG
CTAGTAAACAGATTATTCAATCAGTCCCTGGAGAGCTCAACATGGATCACACAGCCATAT
TGGATCTTGCCCAACAATTGATCTGTTACAATATGGTCACACACTGTCTAAGCT

InterProScan

PANTHER
ESCRT-2_cplx_Snf8 (IPR016689) - T[1-190] 1.1E-81
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[25-175] 4.62E-51
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[92-172] 2.1E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNF8_HUMAN 65.079 % 274 5.52E-94