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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...' > 
  2. Transcript 'KH2012:KH.L4.22.v1.R...' > 
  3. Transcript 'Moocci.CG.ELv1_2.S35...' > 
  4. Transcript 'KH2012:KH.C1.26.v5.A...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S194.g05121.01.t

Possible name(s)

RAB10; RAB8A; RAB8B

Gene model

Phmamm.CG.MTP2014.S194.g05121

Location

S194 [61,383 / 63,898]

Sequences

Amino acid sequence

Length: 214

>Phmamm.CG.MTP2014.S194.g05121.01.p
MSSGGGKTYDYLFKLLLIGDSGVGKTCVLFRFSEDHFNSTFISTIGIDFKIRTIDLDEKK
VKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEK
MILGNKCDMTEKRTVSKERGERLAIEYGIKFMETSAKASQNVDEAFFTMARDIKSKMDQK
LANVPGNSAGNTTITVKSGDKKSGNLFSRWCTLL

Nucleotide sequence

Length: 645

>Phmamm.CG.MTP2014.S194.g05121.01.t
ATGTCTAGCGGTGGTGGAAAAACATATGACTATCTTTTCAAGTTACTCTTAATTGGAGAT
AGTGGCGTTGGGAAGACATGTGTGTTGTTTCGTTTTTCCGAAGATCATTTTAATTCAACA
TTTATTTCAACGATCGGAATTGATTTTAAAATTCGAACCATTGATTTGGATGAGAAGAAA
GTAAAGTTACAGATATGGGACACTGCTGGCCAGGAAAGATTTCGAACTATCACAACTGCT
TATTACCGCGGTGCGATGGGGATTATGTTGGTTTATGATATTACCAATGAAAAATCATTT
GACAATATAAAAAACTGGATTCGTAACATTGAAGAACATGCTTCAGCAGATGTGGAGAAA
ATGATTTTGGGAAATAAGTGTGACATGACTGAAAAGCGTACCGTCTCAAAAGAAAGGGGA
GAAAGGTTGGCAATCGAATATGGAATCAAGTTTATGGAAACAAGTGCAAAAGCCTCACAA
AATGTAGATGAGGCATTCTTTACTATGGCAAGGGACATAAAATCAAAAATGGACCAGAAA
CTGGCAAATGTCCCTGGAAACAGTGCTGGAAACACCACAATAACAGTTAAATCAGGTGAC
AAGAAAAGTGGTAACCTTTTTAGTAGGTGGTGTACACTACTGTGA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[8-185] 1.68E-61
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[11-167] 1.2E-29
Pfam
Small_GTPase (IPR001806) - T[14-174] 4.5E-66

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAB8B_HUMAN 76.555 % 325 1.58E-114
RAB8A_HUMAN 78.095 % 330 1.79E-116
RAB10_HUMAN 72.316 % 270 6.74E-93