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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S199.g05216.02.t

Possible name(s)

AIF1L; EFHD1; EFHD2

Location

S199 [147,037 / 149,360]

Sequences

Amino acid sequence

Length: 230

>Phmamm.CG.MTP2014.S199.g05216.02.p
ELAARLARRQKIIDGDEPAPTEGVEPKPIYAEEGDKDTVDAAGNELADKLRRQGNINDGT
QAVVSPSKKIWNPYTEFKEFSRKQIKEYEKIFKKYDTGKDGYIDLQELKYMMEKLEAPQT
HLGLKAMIKEVDEDFDGKISYREFLLIFRKASMGELTVDGLKQIADLSEIDVSAEGVGGA
KNFFEAKVNKLAESNKFEAEIKQEQEEKKKELEEKKLRREAFKAKAQMFK

Nucleotide sequence

Length: 1,476

>Phmamm.CG.MTP2014.S199.g05216.02.t
ATGAGTTGGCTGCCCGTTTGGCAAGAAGACAAAAGATAATTGATGGAGATGAACCTGCAC
CTACAGAGGGTGTTGAACCCAAACCCATATATGCAGAGGAGGGGGATAAAGATACTGTAG
ATGCAGCGGGAAATGAACTTGCTGACAAATTGAGAAGGCAAGGAAATATCAATGATGGCA
CACAAGCTGTAGTGAGTCCATCGAAAAAAATATGGAACCCGTACACAGAGTTCAAAGAAT
TTTCTCGGAAACAAATCAAAGAATATGAGAAAATTTTTAAAAAATATGACACAGGTAAAG
ATGGATATATTGACCTACAAGAATTAAAATATATGATGGAGAAGCTGGAAGCCCCTCAAA
CTCATCTTGGGTTGAAAGCCATGATAAAAGAAGTGGATGAGGATTTTGATGGAAAGATAA
GCTACCGGGAGTTCTTGCTCATCTTCAGAAAGGCATCCATGGGTGAACTGACGGTGGATG
GACTAAAGCAAATTGCTGATTTGTCGGAAATCGATGTTTCTGCCGAGGGTGTTGGTGGTG
CTAAAAACTTTTTTGAGGCAAAGGTGAACAAGCTAGCAGAATCCAACAAATTTGAAGCTG
AAATAAAACAGGAACAGGAAGAAAAGAAAAAAGAGCTTGAAGAAAAGAAACTAAGAAGGG
AAGCATTTAAGGCAAAGGCGCAAATGTTTAAATAGATGTGGATTTTATGATCAACATTGT
GACATAAATTGTAAATGATTTGTATAAACCCATTGTATCTTTTATAATTTCTAATATTTT
ATGTTTTTATAATTTTTTCCTACTATTTGTGTTGTGGATTATGCACACTCATATATTTCA
GTTGTATGCTTACAGTTTTCCCCTTTTTTGTGGTTGTTTAGATATTCAAGGCAAGGTATT
TGTAGTTTGGCTAGCTAGGATGACATAATCATAGAACACTGTGTTTTGTAGGATTTCAAA
CCAGTTGGTCAAAACAGCAAAAGTGAAAAAAAAAATCTTATTAAACCCCATCTAACCTCC
TAAACTGTACAGAGTGATAAGCAAGATTTCATACTTGCCATTTTCAAGTGTTTTTTTTTA
TGTTATCTATTTTATGTGCGCTGTTACAATGTACTCCTTTGCTATTGCTTGTTGATCAAA
GTCTCCAGCCTGTTCTGTTGGCTGTTTGTACTTGCAACTCTTTATGTTTACCATGCTGCC
TATTCTTTTGATATACCCTAATAGATGTCTGTTTACTGTTGCCGACAAAATGAATCGTGC
TAAAGGTACTTTTGCCACAAAATGTGCACTAAAAAAACTTTTCAAACCTTATATTACTTG
TAAATTTTACCCTATATCCTGTGCAGACCAGCTTAATTGATAATTGGGAAAGTTGTATTA
CTTTTATTTCGATTTAAAGTGCCTTTATTTGTTCATCTTTACCACTGGCAGCTAGTATAT
TAACGACAACGCTACTTTCATATCCCTATTGACCCA

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[66-166] 7.54E-20
ProSiteProfiles
EF_hand_dom (IPR002048) - T[83-118] 15.434 - T[119-154] 10.636
SMART
EF_hand_dom (IPR002048) - T[87-115] 1.2E-5 - T[123-151] 0.051
CDD
EF_hand_dom (IPR002048) - T[87-145] 1.4241E-14
Pfam
EF_hand_dom (IPR002048) - T[89-148] 2.3E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EFHD2_HUMAN 64.249 % 223 7.33E-74
EFHD1_HUMAN 63.095 % 207 1.71E-67