- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S19.g00787.01.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
S19 [92,836 / 105,935]
Amino acid sequence
Length: 602
>Phmamm.CG.MTP2014.S19.g00787.01.p
MPDSQKNLIAIAILGTVALGLHFINQSNAKYTQITWKDFVTKYLSHNMVESLIVKNRKTA
EAIVSGLPDQTLTFTVGSVDSLERNLEHIQEELGIPPNERVYIQYQETFEWSSFTWLIGP
LLILGSIYLTMRSLPKSGGAGGKGGGGPMSGLNPFRSMSESTAKVLNKGDINVSFKDVAG
CEEAKIEILEFVNFLKHPQRYEELGAKIPKGAILSGPPGTGKTLLAKATAGEASVPFISV
SGSEFLEMFVGVGASRVRDMFSLARKNAPCILFIDEVDAIGRKRSGSNMGGNSEADQTLN
QLLVEMDGFNTIGTNVVVLAGTNRSDVLDSALMRPGRFDRQIYVGLPDIKGRSSIFKIHL
KPLKTNLDKDALSRKMAVRTPGFSGADIANVCNEAALIAARDAVPAIEDKHFASAIERIV
AGLEKKTQVLQPNEKATVAYHEAGHAVVSWFLEHADPLLKVSIVPRGKGLGYNLYQPKEM
YLYTSEQMAHRMCTLLGGRCAEKIFFNKITSGAQDDLQKVTQLAYAQVTQFGMSEAVGQV
SFDQSNQSQFQKPFSEATAQLIDEEARKIISSCYDQTIAILEDKKSLTEKLALRLLDQEH
LE
Nucleotide sequence
Length: 2,386
>Phmamm.CG.MTP2014.S19.g00787.01.t
GGATTGTCGGTTTTGTTTTACTCTGTTGCTTCGGCTTTGGGAGTTCTACAGCGATTTATA
AATGCTTTTAACAAAAGTGTTTTTTAGTTTCATGTACTTAACCTGACATAACATGTGGTT
ACGAAGTTAAAACTTAAACGTAGACAATATGTCATATGTCGTTAAATTTGTAAAGCCATT
TGGACTTTATCAAAATGCTCTGAGAAATTTGTTAAAAAAGAGGACGCTACAGTGGACGTT
CTTACATCAGCGAAATGTAAAAACAACGACTTTATTATACAATGAACCAAAAGTTCCAAA
AGGTATTTTATTAAATAAACGTTGTTGCTTAAATTTTTGACATCTGTATTTTTTTCAAAG
GGTTTGAAAAGTTTTTCAAGTCTGGAGGCAACAAAAAAAATAATGGTGCCAAAGAACCTA
AGCCGAAAGAAGAAAATAAATCTTCCAGTGGTCGCTCTCAACCTAAGGCAGAGGAAGCAG
AGACCAGTAAAAAATCTTCCACAAAACCACCATCCAGCAGCAATACATCCTTTCAGCAAC
AATTGCAACAGTTTTTTAAAGAGTCTCCAGGTTCGGGGATGCCAGACAGCCAAAAAAATC
TAATTGCAATTGCTATACTGGGAACTGTAGCTTTGGGATTACATTTTATCAACCAATCAA
ATGCCAAGTATACTCAAATAACATGGAAAGATTTTGTTACCAAGTATTTATCGCATAATA
TGGTTGAAAGTCTGATTGTAAAAAATAGGAAGACTGCAGAAGCAATAGTATCTGGGTTAC
CTGACCAGACTCTGACATTCACTGTTGGAAGTGTTGATTCTCTTGAGCGCAATCTTGAAC
ACATACAAGAGGAGCTTGGAATTCCACCAAATGAGCGTGTTTATATTCAATATCAAGAAA
CATTCGAATGGTCATCATTCACATGGTTAATAGGTCCGTTGCTAATTCTAGGATCGATTT
ACCTCACAATGAGGAGTTTACCAAAATCTGGAGGAGCAGGAGGCAAGGGTGGTGGAGGCC
CAATGTCTGGTTTAAATCCTTTTCGAAGCATGAGTGAATCCACGGCAAAAGTATTAAACA
AGGGAGACATTAATGTGAGCTTTAAAGATGTGGCTGGTTGTGAGGAAGCCAAGATCGAAA
TATTGGAGTTTGTCAACTTTCTAAAACATCCACAACGCTATGAAGAGCTTGGAGCAAAAA
TTCCTAAGGGTGCAATTTTGTCAGGACCACCAGGAACAGGCAAGACTTTGCTGGCCAAAG
CCACAGCTGGTGAAGCAAGTGTTCCTTTCATTTCTGTCAGTGGTTCCGAGTTTCTTGAAA
TGTTCGTGGGTGTGGGAGCTTCCAGGGTTCGTGACATGTTCTCCCTTGCGAGGAAAAACG
CTCCTTGCATCCTCTTTATTGATGAGGTGGACGCAATCGGTCGAAAACGTTCTGGATCTA
ATATGGGTGGAAATTCGGAAGCCGACCAAACTCTTAATCAACTTCTTGTCGAAATGGATG
GATTTAATACGATTGGCACCAACGTTGTGGTTCTGGCCGGAACCAATCGAAGTGATGTGC
TCGACTCTGCCCTCATGCGGCCGGGTCGTTTTGACCGACAGATTTACGTGGGTCTTCCTG
ATATCAAGGGAAGATCGTCTATATTCAAAATTCATCTTAAACCGCTCAAAACCAACCTGG
ACAAGGATGCACTTTCGAGAAAAATGGCTGTAAGGACACCAGGATTTTCTGGTGCTGATA
TCGCGAACGTTTGTAACGAGGCAGCATTGATTGCAGCCAGGGATGCTGTACCCGCGATTG
AGGACAAGCATTTTGCCTCCGCTATTGAGAGGATCGTAGCAGGGCTGGAAAAAAAGACTC
AAGTCCTTCAACCGAACGAGAAAGCTACAGTTGCTTACCACGAGGCTGGTCATGCAGTGG
TCAGTTGGTTTTTGGAGCACGCTGATCCACTACTTAAAGTGTCAATTGTCCCTAGAGGAA
AGGGACTCGGCTATAACTTGTACCAGCCTAAGGAGATGTATTTGTATACCTCTGAGCAGA
TGGCGCACCGCATGTGCACGTTGCTCGGTGGAAGATGCGCGGAGAAAATTTTCTTCAACA
AAATAACTTCCGGAGCTCAGGACGACTTGCAAAAAGTCACGCAACTAGCCTATGCCCAGG
TGACGCAGTTCGGAATGAGTGAGGCGGTTGGACAAGTTTCTTTCGACCAATCCAATCAAT
CCCAATTCCAAAAACCATTCAGCGAGGCCACGGCACAGCTTATTGACGAAGAGGCACGGA
AGATTATTTCCTCGTGTTACGACCAAACCATAGCGATTTTGGAAGACAAGAAAAGTCTTA
CGGAAAAGTTGGCGCTTAGACTTCTGGATCAAGAACACCTCGAACG
| Hamap |
FtsH (IPR005936) - T[6-602] 31.169 |
| Pfam |
Pept_M41_FtsH_extracell (IPR011546) - T[9-100] 1.1E-5 |
| TIGRFAM |
FtsH (IPR005936) - T[114-601] 1.4E-192 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[171-419] 9.89E-65 |
| SMART |
AAA+_ATPase (IPR003593) - T[208-348] 1.2E-21 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[213-345] 6.6E-42 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[316-334] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[429-601] 1.2E-60 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[429-601] 1.83E-59 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 43.76 % | 491 | 2.09E-165 |
| AFG32_HUMAN | 62.976 % | 726 | 0 |
| YMEL1_HUMAN | 42.14 % | 340 | 1.71E-107 |