- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S19.g00787.02.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
S19 [95,477 / 106,137]
Amino acid sequence
Length: 669
>Phmamm.CG.MTP2014.S19.g00787.02.p
MPDSQKNLIAIAILGTVALGLHFINQSNAKYTQITWKDFVTKYLSHNMVESLIVKNRKTA
EAIVSGLPDQTLTFTVGSVDSLERNLEHIQEELGIPPNERVYIQYQETFEWSSFTWLIGP
LLILGSIYLTMRSLPKSGGAGGKGGGGPMSGLNPFRSMSESTAKVLNKGDINVSFKDVAG
CEEAKIEILEFVNFLKHPQRYEELGAKIPKGAILSGPPGTGKTLLAKATAGEASVPFISV
SGSEFLEMFVGVGASRVRDMFSLARKNAPCILFIDEVDAIGRKRSGSNMGGNSEADQTLN
QLLVEMDGFNTIGTNVVVLAGTNRSDVLDSALMRPGRFDRQIYVGLPDIKGRSSIFKIHL
KPLKTNLDKDALSRKMAVRTPGFSGADIANVCNEAALIAARDAVPAIEDKHFASAIERIV
AGLEKKTQVLQPNEKATVAYHEAGHAVVSWFLEHADPLLKVSIVPRGKGLGYNLYQPKEM
YLYTSEQMAHRMCTLLGGRCAEKIFFNKITSGAQDDLQKVTQLAYAQVTQFGMSEAVGQV
SFDQSNQSQFQKPFSEATAQLIDEEARKIISSCYDQTIAILEDKKSLTEKLALRLLDQEH
LERKDLEEVLGERPFKDKSTYEDFVEGTGGEEENTELPEGLKGWEKPSEDSDLEAEEPTT
NSQDKVASS
Nucleotide sequence
Length: 2,010
>Phmamm.CG.MTP2014.S19.g00787.02.t
ATGCCAGACAGCCAAAAAAATCTAATTGCAATTGCTATACTGGGAACTGTAGCTTTGGGA
TTACATTTTATCAACCAATCAAATGCCAAGTATACTCAAATAACATGGAAAGATTTTGTT
ACCAAGTATTTATCGCATAATATGGTTGAAAGTCTGATTGTAAAAAATAGGAAGACTGCA
GAAGCAATAGTATCTGGGTTACCTGACCAGACTCTGACATTCACTGTTGGAAGTGTTGAT
TCTCTTGAGCGCAATCTTGAACACATACAAGAGGAGCTTGGAATTCCACCAAATGAGCGT
GTTTATATTCAATATCAAGAAACATTCGAATGGTCATCATTCACATGGTTAATAGGTCCG
TTGCTAATTCTAGGATCGATTTACCTCACAATGAGGAGTTTACCAAAATCTGGAGGAGCA
GGAGGCAAGGGTGGTGGAGGCCCAATGTCTGGTTTAAATCCTTTTCGAAGCATGAGTGAA
TCCACGGCAAAAGTATTAAACAAGGGAGACATTAATGTGAGCTTTAAAGATGTGGCTGGT
TGTGAGGAAGCCAAGATCGAAATATTGGAGTTTGTCAACTTTCTAAAACATCCACAACGC
TATGAAGAGCTTGGAGCAAAAATTCCTAAGGGTGCAATTTTGTCAGGACCACCAGGAACA
GGCAAGACTTTGCTGGCCAAAGCCACAGCTGGTGAAGCAAGTGTTCCTTTCATTTCTGTC
AGTGGTTCCGAGTTTCTTGAAATGTTCGTGGGTGTGGGAGCTTCCAGGGTTCGTGACATG
TTCTCCCTTGCGAGGAAAAACGCTCCTTGCATCCTCTTTATTGATGAGGTGGACGCAATC
GGTCGAAAACGTTCTGGATCTAATATGGGTGGAAATTCGGAAGCCGACCAAACTCTTAAT
CAACTTCTTGTCGAAATGGATGGATTTAATACGATTGGCACCAACGTTGTGGTTCTGGCC
GGAACCAATCGAAGTGATGTGCTCGACTCTGCCCTCATGCGGCCGGGTCGTTTTGACCGA
CAGATTTACGTGGGTCTTCCTGATATCAAGGGAAGATCGTCTATATTCAAAATTCATCTT
AAACCGCTCAAAACCAACCTGGACAAGGATGCACTTTCGAGAAAAATGGCTGTAAGGACA
CCAGGATTTTCTGGTGCTGATATCGCGAACGTTTGTAACGAGGCAGCATTGATTGCAGCC
AGGGATGCTGTACCCGCGATTGAGGACAAGCATTTTGCCTCCGCTATTGAGAGGATCGTA
GCAGGGCTGGAAAAAAAGACTCAAGTCCTTCAACCGAACGAGAAAGCTACAGTTGCTTAC
CACGAGGCTGGTCATGCAGTGGTCAGTTGGTTTTTGGAGCACGCTGATCCACTACTTAAA
GTGTCAATTGTCCCTAGAGGAAAGGGACTCGGCTATAACTTGTACCAGCCTAAGGAGATG
TATTTGTATACCTCTGAGCAGATGGCGCACCGCATGTGCACGTTGCTCGGTGGAAGATGC
GCGGAGAAAATTTTCTTCAACAAAATAACTTCCGGAGCTCAGGACGACTTGCAAAAAGTC
ACGCAACTAGCCTATGCCCAGGTGACGCAGTTCGGAATGAGTGAGGCGGTTGGACAAGTT
TCTTTCGACCAATCCAATCAATCCCAATTCCAAAAACCATTCAGCGAGGCCACGGCACAG
CTTATTGACGAAGAGGCACGGAAGATTATTTCCTCGTGTTACGACCAAACCATAGCGATT
TTGGAAGACAAGAAAAGTCTTACGGAAAAGTTGGCGCTTAGACTTCTGGATCAAGAACAC
CTCGAACGAAAGGACTTAGAAGAAGTTTTAGGCGAGCGCCCGTTTAAGGACAAATCCACG
TATGAGGATTTCGTGGAAGGCACAGGTGGTGAAGAAGAAAATACTGAACTTCCAGAGGGT
CTTAAAGGTTGGGAAAAACCATCGGAGGACTCTGACTTAGAGGCCGAAGAACCTACGACA
AATTCTCAAGATAAAGTCGCAAGTTCTTGA
| Hamap |
FtsH (IPR005936) - T[6-634] 31.903 |
| Pfam |
Pept_M41_FtsH_extracell (IPR011546) - T[9-100] 1.2E-5 |
| TIGRFAM |
FtsH (IPR005936) - T[114-610] 5.4E-195 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[171-419] 1.26E-64 |
| SMART |
AAA+_ATPase (IPR003593) - T[208-348] 1.2E-21 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[213-345] 7.8E-42 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[316-334] . |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[429-618] 1.15E-63 |
| Pfam |
Peptidase_M41 (IPR000642) - T[429-609] 1.1E-62 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 43.226 % | 499 | 1.41E-167 |
| AFG32_HUMAN | 63.065 % | 784 | 0 |
| YMEL1_HUMAN | 42.06 % | 345 | 2.53E-108 |