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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C8.611.v1....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S19.g00799.01.t

Possible name(s)

EPDR1

Gene model

Phmamm.CG.MTP2014.S19.g00799

Location

S19 [175,248 / 176,877]

Sequences

Amino acid sequence

Length: 180

>Phmamm.CG.MTP2014.S19.g00799.01.p
MLKIILVCVVGLTCVYAPEPPPRCVAPAYFQAQVNMHDHETNFFRAGFFSYDALGEKVHF
LEYLQENATRPQATELFLYREKKHYRIDLKTGICNVSALDLEFRPIAVREDSRLLGDDVI
GTLDEPGEGVMISVWGHHVDDSRAQGNMTVSFTRDDCIPFTESFYGMSKTSKQELHYHRT

Nucleotide sequence

Length: 543

>Phmamm.CG.MTP2014.S19.g00799.01.t
ATGCTGAAGATCATCTTGGTTTGTGTGGTAGGTTTGACCTGCGTTTATGCACCTGAGCCC
CCTCCTAGATGCGTTGCACCGGCTTACTTCCAGGCCCAAGTTAACATGCACGATCACGAA
ACTAACTTTTTCCGAGCCGGATTTTTCTCTTACGACGCCCTGGGTGAAAAAGTCCATTTC
CTTGAGTACTTGCAAGAAAATGCCACCCGACCACAAGCAACTGAATTGTTCTTGTATCGC
GAGAAAAAACACTATCGCATCGATTTGAAAACCGGAATTTGCAACGTTTCTGCTCTTGAC
TTGGAGTTTCGGCCAATCGCTGTGCGTGAGGATTCTCGTTTGCTGGGCGATGACGTCATC
GGTACTTTGGACGAGCCAGGAGAAGGAGTTATGATTTCTGTGTGGGGACACCATGTCGAC
GACTCTAGAGCTCAAGGCAACATGACTGTGTCGTTCACCAGAGATGATTGCATTCCCTTC
ACCGAGTCATTCTACGGAATGTCCAAAACTTCAAAACAGGAATTACACTACCATCGCACG
TAA

InterProScan

PANTHER
Ependymin (IPR001299) - T[4-171] 3.2E-33
Pfam
Ependymin (IPR001299) - T[69-169] 3.5E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value