- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1.g00019.01.t
Possible name(s)
ITGA10; ITGA11; ITGAD
Gene model
Location
S1 [184,564 / 201,707]
Amino acid sequence
Length: 1,168
>Phmamm.CG.MTP2014.S1.g00019.01.p
MLVAWVLISALLREICAFNVDVSSEAVEVLKINVSGSTGPPIYAGYKLSAKVDNKHLRLL
VGAPKYDPNPVKPYLTNGSIIDCKVDLAQFSTSHSHSENQSTLVGASSPIQPNCSVYLTN
TELPLGDNHVSVSDSLGLSFFPINNTELTVCTYSRQKKCYPSYFTPGACFSKASVWKPVK
WNEKRCFLHFVDVIYVVDSSNSITQAEFDTMKNVMLSVSEVFRNIIGDTTQVGILQYGQL
NGRNLTYLSSSPRHYQTPVRLGDCRTVICLQEAITNNMQHLRAANTYTARAIERAVKVGK
NAIDFPRSKNAAVSEKVIVLITDGKATDYKRLQTSYHLTEANNITVYAIGVGSRIEVDQL
RTSANGAVSNERVLKATNFQQLLDTLANLTQIISKGITEGQTVTSVENATENAMFGFSGT
TTQDGGVAIGAVGSYQNTGAVVTYPSSDLTNPSMLKFDQVAAALPGLDMNTYDSYLGYAI
TSGRYEGGTTTYIAASAPRYLLLGAVVLFSEVNGAKTTIQANLKHQQHGSYFGGTLLTCD
TDNDGKDELLVAAPLYIGENYDEGRVFVYSTRNRSSISDWASPTYEATQLSGNRASGGRF
GTAMTCARDLDQDGYYDVIIAAPYAESGRGIVYVYHGSRHGLVDIVAQTISASQLFHPGL
TNFGLSLEGGVDVDDNKYPDVIVGAPTSDQVVVLRSRPVVSFNSSLEFNKPSIDVVQCLL
APNASCAVLTACHVYTGKSVELTQEIEFTIKIDEILGRVEIKQNLASSQGTTLFKSTMSL
VKDLQSCVALQVFANPNANNFESAVKANLTYSLPHSHTSRPLASVERLYGNTFTTASINW
KKNCGNDSKCNYDLAVDSKVVAHTASPSKDEALADGETLVLTSDQLVIVKVNYTNKREIA
YGTRIAVTYTDGFNWNRLQNIVSSTSSHSCVGDQIIETVHGGERTTELTYQHNQYLKDVM
LNGSWVEGLGYSNIPESTVTFKYPRFFNETQRLLYLFKLDCYTASGNARCTCNQTNVNPL
NLSVERNQTGTSNHTFTVIPNPSVLKNMLFNCSGNDGNTKCDTVTCHVTDLGVGDVIRFQ
ARFRLWTKTLRLSGNQSVLYQSIFTFDAGKSPQVIDSEQNSLPPISSQLGFFQSKYAGMK
EEAQNWQTAAANEGETNQSFESNQSNGI
Nucleotide sequence
Length: 3,507
>Phmamm.CG.MTP2014.S1.g00019.01.t
ATGCTAGTGGCCTGGGTGTTGATCTCTGCACTACTGAGGGAAATTTGCGCTTTCAACGTT
GACGTTTCATCCGAAGCGGTGGAAGTATTGAAGATCAATGTATCCGGGTCGACAGGGCCG
CCTATTTATGCCGGATACAAACTAAGTGCGAAGGTTGACAACAAACATCTAAGGTTGCTT
GTTGGTGCCCCAAAGTACGACCCCAATCCAGTGAAGCCTTACTTGACGAACGGTTCCATC
ATTGATTGCAAAGTGGACTTGGCCCAATTTTCAACTTCACATTCACACAGTGAAAACCAA
AGCACCTTGGTTGGAGCTTCTTCGCCGATTCAACCAAACTGTTCTGTGTATCTGACAAAC
ACCGAGCTGCCATTGGGAGACAACCACGTGTCTGTTTCTGATTCGCTCGGCTTATCTTTC
TTTCCAATCAACAATACGGAATTAACAGTTTGCACGTACAGCCGACAGAAGAAATGTTAC
CCAAGTTACTTTACACCCGGCGCTTGTTTCTCAAAAGCGAGTGTCTGGAAGCCGGTTAAG
TGGAACGAAAAGCGTTGCTTTCTCCACTTTGTCGATGTCATCTACGTAGTGGACAGTTCC
AACTCAATCACTCAAGCTGAGTTCGACACCATGAAGAACGTGATGCTTTCGGTTTCCGAA
GTTTTCCGAAACATTATCGGCGACACAACACAAGTTGGAATACTTCAATACGGGCAGCTC
AACGGCAGAAATCTGACATATCTATCCTCGAGCCCGAGACATTACCAAACCCCGGTGAGA
CTTGGAGATTGTCGGACTGTAATATGCTTGCAGGAAGCGATCACCAACAACATGCAACAC
TTAAGAGCGGCAAACACATACACAGCCAGGGCTATTGAACGAGCTGTAAAGGTGGGGAAA
AATGCGATTGACTTTCCACGGTCTAAAAACGCAGCAGTTTCAGAGAAAGTGATTGTTCTT
ATTACTGATGGCAAAGCGACGGATTACAAAAGATTGCAAACAAGTTACCATTTGACGGAG
GCCAACAACATAACTGTGTACGCAATCGGAGTTGGGTCCAGAATCGAAGTCGACCAACTC
AGAACGAGTGCAAACGGGGCAGTTTCAAACGAACGAGTACTCAAAGCAACAAACTTCCAG
CAACTACTCGATACTCTGGCTAACCTCACGCAAATCATATCAAAAGGAATTACTGAAGGA
CAAACTGTAACCAGTGTTGAAAACGCGACGGAAAACGCTATGTTTGGATTTTCTGGAACC
ACAACGCAGGACGGAGGTGTGGCGATCGGGGCGGTGGGAAGTTACCAAAACACTGGAGCG
GTCGTCACGTACCCCTCATCGGATTTAACCAACCCGAGTATGTTGAAATTTGATCAGGTC
GCGGCCGCGTTGCCTGGATTGGACATGAACACATACGATTCCTACCTAGGCTACGCTATA
ACAAGTGGGAGATACGAAGGTGGAACAACAACTTACATAGCGGCCTCTGCACCACGTTAT
CTTCTGCTCGGAGCGGTTGTGCTGTTTTCTGAAGTGAACGGAGCCAAAACCACAATCCAA
GCGAACTTAAAACACCAACAACACGGAAGCTACTTTGGAGGTACATTGCTAACATGTGAT
ACCGACAACGATGGAAAAGATGAACTGCTGGTTGCTGCACCGCTTTACATTGGGGAGAAC
TACGATGAAGGAAGAGTATTCGTGTACTCGACTCGAAATAGGAGTTCTATTTCAGATTGG
GCATCTCCCACATACGAAGCAACGCAACTGTCAGGAAACCGCGCCTCAGGTGGCAGGTTT
GGAACAGCTATGACGTGTGCACGCGACCTCGACCAAGACGGATACTATGACGTCATAATA
GCGGCGCCATACGCCGAGTCAGGTCGCGGTATTGTTTACGTTTACCATGGAAGTCGCCAC
GGTCTGGTGGACATCGTAGCGCAGACAATATCTGCGTCTCAACTTTTCCATCCCGGTCTT
ACAAATTTCGGGTTGTCACTTGAGGGCGGTGTCGACGTCGATGACAACAAGTACCCGGAT
GTTATTGTTGGAGCGCCAACTAGTGACCAAGTCGTCGTGCTTAGGTCTCGTCCGGTTGTC
AGTTTCAACAGCAGTCTCGAGTTTAACAAACCCAGTATAGATGTGGTGCAATGTCTGCTC
GCCCCAAATGCGAGTTGCGCGGTTCTTACTGCTTGTCACGTTTACACAGGAAAGTCGGTA
GAACTAACTCAAGAAATCGAATTCACAATCAAGATTGACGAGATCCTGGGGCGAGTTGAG
ATTAAACAAAACCTTGCATCGTCGCAAGGAACCACTTTGTTCAAAAGTACGATGTCACTG
GTCAAAGATTTGCAAAGCTGCGTTGCTTTGCAAGTATTTGCCAACCCAAACGCAAACAAC
TTTGAATCGGCAGTGAAGGCAAATTTAACTTATTCTCTTCCACATTCACACACCAGTAGA
CCCTTGGCGTCAGTGGAGAGATTATATGGAAATACATTTACCACTGCGAGCATCAACTGG
AAGAAGAATTGCGGAAATGACAGCAAGTGTAACTACGATCTCGCTGTAGACAGCAAAGTT
GTAGCCCACACTGCCAGTCCAAGTAAAGATGAAGCTCTTGCTGACGGCGAGACCCTGGTA
TTAACATCTGACCAACTCGTGATTGTGAAAGTGAATTACACAAACAAAAGGGAGATTGCT
TATGGCACAAGGATTGCTGTGACTTACACTGATGGATTCAACTGGAATCGGCTTCAAAAC
ATCGTCAGTTCAACTTCCAGCCACAGTTGTGTGGGGGACCAGATTATAGAGACCGTCCAT
GGTGGCGAGAGAACAACAGAACTTACGTATCAACACAACCAATATCTCAAAGATGTCATG
CTTAATGGGTCTTGGGTCGAGGGACTGGGTTATTCGAACATTCCAGAATCAACAGTGACT
TTCAAATATCCCCGATTCTTTAACGAAACGCAGAGGTTGCTTTATCTCTTCAAGCTCGAT
TGTTACACAGCATCGGGAAACGCAAGGTGTACTTGCAACCAAACCAACGTCAATCCACTG
AATCTGAGTGTTGAACGAAATCAAACTGGAACCTCAAATCACACTTTTACAGTCATCCCC
AACCCGTCAGTGCTGAAGAACATGCTATTTAACTGCTCGGGTAACGATGGCAACACCAAG
TGCGACACCGTCACTTGTCACGTGACCGACCTCGGTGTTGGTGACGTCATCCGGTTTCAG
GCGCGCTTCCGGTTATGGACCAAAACACTCCGGCTTTCAGGGAACCAAAGTGTACTCTAC
CAATCAATCTTCACATTCGATGCAGGGAAATCACCTCAGGTCATCGACAGCGAGCAAAAC
AGTTTGCCGCCAATTTCCTCACAATTGGGATTTTTTCAAAGCAAGTACGCTGGTATGAAG
GAGGAAGCGCAGAACTGGCAAACCGCAGCTGCAAATGAAGGAGAAACAAACCAAAGTTTT
GAATCAAACCAAAGCAACGGAATTTAA
| ProSiteProfiles |
Int_alpha_beta-p (IPR013519) - T[32-92] 5.767 - T[401-453] 9.766 - T[462-516] 5.782 - T[517-578] 10.957 - T[586-644] 10.78 - T[648-711] 13.228 |
| Gene3D |
Integrin_alpha_N (IPR028994) - T[102-698] 6.1E-111 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[160-393] 3.59E-26 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[188-402] 6.1E-111 |
| SMART |
VWF_A (IPR002035) - T[190-394] 3.3E-12 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[192-393] 21.242 |
| Pfam |
VWF_A (IPR002035) - T[192-384] 4.6E-19 |
| SMART |
Int_alpha_beta-p (IPR013519) - T[472-524] 0.34 - T[528-585] 1.3E-4 - T[596-651] 2.8E-10 - T[659-710] 9.5E-4 |
| PRINTS |
Integrin_alpha (IPR000413) - T[473-485] 1.9E-36 - T[525-545] 1.9E-36 - T[599-623] 1.9E-36 - T[663-684] 1.9E-36 - T[690-709] 1.9E-36 |
| Pfam |
FG-GAP (IPR013517) - T[532-569] 8.1E-5 - T[600-635] 8.7E-6 |
| Pfam |
Integrin_alpha-2 (IPR013649) - T[696-931] 1.2E-20 - T[969-1032] 1.7E-7 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[698-846] 4.08E-9 - T[847-930] 4.39E-5 - T[967-1113] 1.07E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITAD_HUMAN | 28.727 % | 214 | 1.61E-56 |
| ITA11_HUMAN | 27.414 % | 215 | 7.45E-57 |
| ITA10_HUMAN | 26.851 % | 204 | 1.57E-53 |