Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1.g00036.01.t

Possible name(s)

SLC10A1; SLC10A2; SLC10A6

Gene model

Phmamm.CG.MTP2014.S1.g00036

Location

S1 [410,556 / 417,894]

Sequences

Amino acid sequence

Length: 333

>Phmamm.CG.MTP2014.S1.g00036.01.p
MYASTEPYLNDSSDTTAAPQTTDQLSVILNILIAVLLAVIMVGMGCAVEIPKILFHLKRP
TGILTGFVCQFGLMPLIAYLLTLAFQLSDIQALALLIQASCPGGSSSNVATYWMRGDMDL
SITMTTCSTLLALGMMPLLLFLYGQGFDESLVVPFESIAIILASLVVPIALGVFIRYKFP
RQAMIVLKVSCTNAFEQCNKHFQRRTVCVETGIQNTQLTGSIILLSGFSMEQIGEMIIVP
LLYAMAQVFWALCIAVGFRVYEKKRGGRVSIDNLDESESSYKGNMKETSEKEKDSDVSKS
ESGSNFDRPPSYSSSLGIENPAAESIYEHEEAL

Nucleotide sequence

Length: 1,002

>Phmamm.CG.MTP2014.S1.g00036.01.t
ATGTACGCCTCAACCGAACCCTACCTCAACGACTCGTCTGATACCACAGCAGCGCCTCAA
ACCACGGATCAGCTCTCAGTTATACTGAATATCCTAATTGCGGTGTTACTGGCCGTTATA
ATGGTGGGAATGGGGTGTGCTGTGGAAATACCAAAGATTCTCTTTCACCTAAAACGACCG
ACCGGAATTTTAACTGGTTTCGTTTGTCAATTTGGTTTGATGCCGCTTATAGCTTACCTC
CTTACTCTGGCCTTCCAACTATCCGACATTCAGGCTTTGGCTCTTCTTATACAAGCATCC
TGTCCTGGTGGGTCAAGTTCCAATGTGGCGACTTACTGGATGAGAGGAGACATGGATCTG
AGCATCACCATGACAACGTGCTCCACCCTTCTTGCTCTAGGGATGATGCCATTGCTCCTG
TTTCTGTACGGACAGGGTTTTGACGAAAGCCTGGTGGTGCCTTTTGAATCCATAGCCATT
ATCCTCGCTTCTCTTGTGGTTCCAATCGCTCTTGGAGTTTTTATTCGGTACAAGTTTCCC
AGACAAGCCATGATTGTGTTGAAGGTGAGTTGCACAAATGCATTTGAGCAATGCAATAAA
CATTTCCAACGACGCACTGTTTGTGTGGAGACAGGAATCCAGAACACCCAACTTACCGGT
TCAATTATTCTGCTTTCCGGCTTTTCAATGGAGCAGATTGGCGAAATGATCATTGTTCCT
CTCCTCTATGCGATGGCTCAGGTATTCTGGGCACTTTGTATCGCTGTCGGGTTTAGAGTT
TATGAGAAGAAACGGGGAGGGAGAGTAAGTATTGACAACTTGGACGAATCAGAATCTTCA
TATAAAGGCAACATGAAAGAAACTTCGGAGAAAGAGAAAGACAGCGACGTATCGAAAAGT
GAATCAGGAAGCAACTTTGACCGGCCTCCCTCCTACTCAAGTTCACTGGGAATCGAAAAC
CCAGCTGCAGAGTCAATATACGAACACGAAGAAGCGCTTTAA

InterProScan

PANTHER	Bilac:Na_transpt (IPR004710) - T[23-193] 1.5E-90 - T[200-301] 1.5E-90
Pfam	BilAc:Na_symport/Acr3 (IPR002657) - T[34-181] 4.5E-38

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NTCP_HUMAN	33.438 %	154	5.74E-44
NTCP2_HUMAN	48.901 %	192	1.17E-58
SOAT_HUMAN	47.024 %	186	4.23E-56