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  1. Transcript 'Haaura.CG.MTP2014.S2...'
  2. Molecular Tool 'pSoxB2>Dll-C'
  3. Transcript 'KH2012:KH.C5.343.v1....'
  4. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S20.g00835.01.t

Possible name(s)

BTRC; FBXW11; FBXW7

Location

S20 [55,786 / 66,837]

Sequences

Amino acid sequence

Length: 751

>Phmamm.CG.MTP2014.S20.g00835.01.p
MDDSSKHAGGSRNKAVDTGLSSSKRVGGGSKRREKCGARSGVATSGVTSHFSVDNCQQAS
ADNKSESKMKKSLALLTHSRRTRSSEKSNPQIFTCSNNTNPSSEPTPDADVDLSTLYSGC
VTRGQINRVKKIIGECSPSHVTDMLPMNTRSSKRLASDQNHNEKMQVDDSSTSSAQRKIK
SLMKRKHDALSEVPKSPEKKACRVLGHSSSSLDSPKSPPERRCITRNSVYARAVHSPPHT
EQHQPSSPGPSHDAVEVLTAPPTPTLALPEGTDDWLRRFLKWNAKDKIQALENLIGVCQP
HEVRHMLEIIEPQFQRDFISLLPKELALHVLSFLEPRDLLIAAQTCRYWRILTEDNLMWR
EKCKEEGISEPYVAKVLKHNWRNKKSFSAGTKSTWKAAFLRHVRIETNWREGKERISKVL
KGHDDHVITCLQFNGSRIVSGSDDNTLKVWSAISGKCLRTLTGHTGGVWASQMRKNLIIS
GSTDRTLKIWNADTGNCVHTLYGHTSTVRCLALHDNIVVSGSRDATLRVWNIEDGECLHV
LVGHMAAVRCVCYDGRRVVSGAYDYMVKVWDPVTEECLHTLQGHTNRVYSLQFDGTYVVS
GSLDTSIRVWELETGTCLHTLMGHQSLTSGMVLRGNILVSGNADSTVKVWDILTGECLKT
LEGSNKHLSAVTCLQFRGKFIITSSDDGTVKLWDIETGKVIRDLVTLESRGSGGVVWRIR
ASQTKLVCAFGSRNGTEETKLMVLDFDPDSK

Nucleotide sequence

Length: 2,256

>Phmamm.CG.MTP2014.S20.g00835.01.t
ATGGATGATTCATCAAAACATGCTGGAGGTTCAAGAAACAAGGCTGTAGATACTGGATTG
AGCAGTTCCAAACGAGTTGGTGGTGGCAGTAAAAGGCGTGAAAAATGTGGTGCTCGTTCT
GGGGTGGCCACATCAGGGGTAACATCCCACTTTAGTGTGGATAACTGCCAACAAGCATCT
GCTGATAACAAAAGTGAGTCAAAGATGAAGAAAAGCCTTGCTTTGCTAACACATTCACGT
AGGACGCGCTCAAGTGAGAAAAGCAATCCTCAAATTTTCACATGTAGCAATAACACCAAT
CCCTCAAGTGAACCGACACCTGATGCTGATGTGGATCTCAGCACTTTATATTCAGGATGT
GTGACCAGAGGACAGATTAATCGAGTGAAGAAGATAATAGGTGAATGTTCGCCCTCCCAT
GTCACAGATATGTTACCAATGAACACACGGTCCTCGAAGCGTCTTGCAAGTGATCAAAAT
CACAATGAAAAAATGCAAGTAGATGACAGTAGCACTTCTTCTGCCCAGCGAAAAATCAAA
TCACTGATGAAACGCAAGCATGACGCGTTAAGCGAAGTTCCCAAGTCGCCGGAGAAGAAA
GCATGCAGAGTGCTCGGTCATTCTTCTTCATCACTGGACTCACCCAAATCACCACCAGAG
CGAAGATGCATAACAAGAAACAGTGTTTATGCTCGAGCAGTTCACTCACCTCCACACACT
GAACAACATCAGCCAAGTAGTCCAGGACCCTCCCATGATGCTGTTGAAGTTTTAACTGCA
CCACCAACTCCCACATTAGCTTTGCCAGAAGGAACTGATGACTGGCTTCGAAGATTTTTG
AAGTGGAATGCCAAAGACAAGATCCAAGCTCTTGAGAATCTTATTGGTGTTTGTCAACCG
CATGAAGTTCGTCATATGCTTGAAATCATTGAACCACAGTTTCAGCGCGATTTTATCTCA
TTACTACCTAAGGAGCTTGCTCTCCATGTCTTAAGTTTCCTCGAGCCAAGGGACCTCTTA
ATAGCAGCACAGACATGCAGGTACTGGCGCATCCTTACTGAAGATAACCTTATGTGGAGG
GAGAAATGCAAAGAGGAAGGGATCAGTGAACCTTATGTAGCTAAAGTTTTAAAGCACAAT
TGGAGAAACAAGAAATCTTTCAGTGCTGGAACCAAAAGCACATGGAAGGCTGCGTTTCTG
CGACATGTCCGAATAGAAACAAATTGGAGGGAAGGAAAAGAAAGAATATCTAAGGTGCTA
AAGGGCCACGATGACCATGTGATAACCTGCTTGCAATTTAATGGATCGCGGATAGTTAGT
GGTTCAGACGACAACACATTAAAAGTCTGGTCAGCCATTTCTGGAAAGTGTCTAAGGACA
TTAACAGGACACACTGGTGGTGTATGGGCCTCTCAAATGCGCAAAAACCTTATTATAAGT
GGTTCGACTGACCGGACCCTTAAAATCTGGAATGCAGACACAGGAAATTGTGTTCACACC
CTGTATGGCCATACATCCACTGTACGATGCCTTGCATTGCATGACAATATAGTGGTAAGC
GGGTCTCGCGACGCAACTTTGCGAGTTTGGAATATCGAAGACGGTGAGTGTCTCCATGTT
CTTGTTGGTCACATGGCGGCAGTGAGGTGCGTGTGTTACGACGGTCGACGTGTGGTGTCC
GGTGCTTACGACTACATGGTCAAGGTGTGGGACCCAGTAACCGAAGAATGCCTACACACC
TTACAAGGACATACCAACCGCGTTTACTCATTACAGTTCGACGGAACGTACGTTGTAAGC
GGAAGCCTAGATACATCTATACGTGTTTGGGAGTTGGAGACAGGAACATGCCTTCACACG
CTTATGGGTCACCAGTCACTAACGTCGGGTATGGTGCTGCGTGGCAACATCCTCGTTTCT
GGGAACGCCGACTCCACTGTCAAAGTGTGGGATATTCTAACCGGGGAATGCCTGAAGACG
CTAGAAGGTTCCAATAAACATCTGAGTGCCGTCACGTGCTTACAGTTTCGTGGAAAATTT
ATTATCACAAGTTCCGACGATGGCACTGTAAAACTCTGGGACATCGAAACTGGGAAGGTC
ATTCGGGATTTGGTGACGTTGGAATCACGTGGTTCGGGTGGTGTCGTTTGGCGAATTCGC
GCCTCGCAGACCAAACTGGTTTGCGCATTCGGCAGTCGCAACGGTACCGAAGAAACCAAA
CTGATGGTTCTCGACTTCGACCCGGACTCTAAGTGA

InterProScan

SUPERFAMILY
F-box-like_dom_sf (IPR036047) - T[302-406] 2.35E-23
ProSiteProfiles
F-box_dom (IPR001810) - T[316-362] 12.597
Pfam
F-box_dom (IPR001810) - T[320-363] 3.1E-11
SMART
F-box_dom (IPR001810) - T[322-362] 2.4E-7
SMART
WD40_repeat (IPR001680) - T[413-451] 4.9E-6 - T[454-491] 2.7E-7 - T[494-531] 1.7E-9 - T[534-571] 8.1E-6 - T[574-611] 7.6E-9 - T[614-651] 3.7E-4 - T[654-694] 7.9E-7
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[413-751] 7.8E-125
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[415-736] 3.11E-97
Pfam
WD40_repeat (IPR001680) - T[417-451] 1.6E-6 - T[455-491] 1.6E-5 - T[495-531] 3.6E-6 - T[535-571] 8.6E-6 - T[576-610] 1.5E-7 - T[615-651] 0.015 - T[655-694] 1.0E-6
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[420-703] 65.437
ProSiteProfiles
WD40_repeat (IPR001680) - T[434-460] 10.341 - T[461-500] 12.58 - T[501-540] 14.652 - T[541-580] 10.709 - T[581-620] 15.12 - T[621-660] 12.079 - T[664-703] 13.249
ProSitePatterns
WD40_repeat_CS (IPR019775) - T[478-492] . - T[518-532] . - T[598-612] . - T[638-652] . - T[681-695] .
PRINTS
G-protein_beta_WD-40_rep (IPR020472) - T[518-532] 8.5E-9 - T[638-652] 8.5E-9 - T[681-695] 8.5E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FBXW7_HUMAN 67.193 % 770 0
FBW1A_HUMAN 32.739 % 246 4.6E-72
FBW1B_HUMAN 31.614 % 244 4.67E-72





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