- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S20.g00861.01.t
Possible name(s)
SLC6A1; SLC6A13; SLC6A5
Gene model
Location
S20 [324,543 / 333,189]
Amino acid sequence
Length: 614
>Phmamm.CG.MTP2014.S20.g00861.01.p
MDTEKPMIEGGKKAKDEPERETWDKKIDFFLSCIGYAVGLGNIWRFPYLCYRNGGGVGYC
MIIISFVVCVYYNVIIAYSLHFIVNSFTSTLPWSTCNNDWNTDYCRDKSFNSTISSPPEW
TGVNCSKGFGWFDGNGQTNVSADNLNAVLYLNRSDWANTTEINGSCVEFKTASQEYFTYK
VLRLTEGIEVTGNMQWELFGFLVLAWVIVFFCLFKGVKWSGKVVYFTATFPYVVLLILLI
RGAMEEGAYKGVEYYITPNITKLGDIRVWSDAAVQIFYSLGAAWGVLLSYSSLNKFNNNV
YRDALSICAINCGTSILAGFVVFSVLGALAHQTGRDVADVVDQGAGLAFVAYPAAVANLP
FAPIWAFLFFFMLLNLGLDSQFGMIEAVVNGLFDEFPIFRKNRVKFLAAMCFIQLILAIP
MVTESGMYWVTLIDWYASGFSLMIAAVCEIGCIAWVYGVKRFLYDIECMIGYKPALWQWW
WFAWMIMTPLTIVLLMITHLAFYSPATYNGVAFPSWAEALGWLSAMLSILSIPGWAVYQI
LYHPRAKGTFTERVRELLKCDPDWGPRDPKIKYKYRHTENVEPKELINISKKSENDDDST
TSKTSDPPSYNSDV
Nucleotide sequence
Length: 1,845
>Phmamm.CG.MTP2014.S20.g00861.01.t
ATGGATACAGAGAAGCCCATGATCGAGGGGGGAAAGAAAGCAAAGGACGAGCCAGAACGA
GAAACATGGGACAAGAAAATCGACTTTTTTCTTTCTTGCATAGGATATGCCGTAGGGCTG
GGAAACATTTGGAGGTTTCCTTATCTTTGCTATAGAAATGGCGGAGGTGTTGGCTACTGC
ATGATTATTATCTCATTTGTGGTGTGTGTCTACTACAACGTGATCATTGCATACAGCCTT
CATTTCATCGTAAATTCGTTTACGTCCACTTTGCCGTGGTCTACATGCAATAACGACTGG
AACACTGACTATTGCAGAGACAAGTCATTCAATTCAACAATAAGCTCCCCGCCAGAATGG
ACCGGAGTCAACTGCTCCAAAGGTTTCGGGTGGTTCGATGGAAACGGCCAGACAAACGTA
TCAGCCGACAACTTGAATGCAGTTTTATATCTGAACCGTAGCGACTGGGCGAACACGACC
GAAATCAACGGGAGTTGTGTCGAGTTTAAAACTGCTTCCCAGGAATACTTCACGTACAAG
GTTCTGCGTCTCACGGAAGGGATCGAAGTAACGGGCAACATGCAGTGGGAGTTGTTCGGT
TTTCTCGTACTCGCCTGGGTCATAGTGTTTTTCTGCCTCTTCAAGGGAGTCAAGTGGAGT
GGGAAGGTTGTTTATTTCACCGCAACCTTTCCATATGTGGTTCTCTTGATTTTACTCATT
CGCGGTGCAATGGAGGAGGGAGCCTACAAGGGTGTAGAGTACTACATAACACCTAACATC
ACCAAGTTAGGGGACATACGGGTTTGGTCGGACGCGGCCGTTCAGATTTTCTACTCGCTC
GGGGCGGCCTGGGGAGTTTTGTTGTCATATTCTTCGCTGAACAAGTTCAACAATAATGTG
TACAGGGATGCTCTTTCAATTTGTGCCATCAACTGTGGGACAAGCATCCTTGCAGGTTTC
GTCGTTTTCTCGGTACTCGGTGCTTTAGCCCATCAGACAGGCAGAGATGTAGCCGACGTT
GTAGATCAGGGTGCCGGGCTCGCGTTCGTCGCTTATCCTGCTGCTGTGGCCAATCTTCCC
TTCGCCCCCATCTGGGCATTTCTTTTTTTCTTCATGCTTTTGAATCTTGGTTTGGACAGC
CAGTTTGGAATGATTGAGGCTGTTGTCAACGGCTTGTTTGACGAGTTCCCCATCTTCCGA
AAAAATCGAGTGAAATTTTTGGCCGCCATGTGTTTCATTCAACTTATTTTAGCGATCCCT
ATGGTGACTGAGAGCGGAATGTACTGGGTGACTTTGATTGATTGGTACGCATCTGGTTTC
TCTCTTATGATAGCTGCGGTCTGTGAGATCGGCTGTATCGCATGGGTGTACGGTGTCAAG
CGCTTCTTGTACGACATTGAATGCATGATTGGCTACAAACCCGCGCTCTGGCAATGGTGG
TGGTTCGCCTGGATGATTATGACGCCACTTACCATAGTTCTTCTGATGATCACACACTTG
GCATTCTACAGTCCTGCAACGTACAATGGGGTTGCTTTTCCATCGTGGGCCGAAGCATTG
GGTTGGTTGTCAGCCATGCTTTCTATTCTGTCCATTCCTGGATGGGCAGTTTACCAAATT
CTTTACCACCCAAGAGCAAAGGGAACGTTCACCGAGAGAGTTCGGGAATTGTTGAAGTGT
GATCCAGACTGGGGTCCACGGGATCCTAAAATTAAATACAAGTATCGACATACCGAAAAC
GTTGAACCGAAGGAATTGATAAACATCAGTAAAAAGTCTGAAAACGATGACGATTCAACC
ACCTCAAAAACGTCAGATCCACCGTCCTACAATTCCGATGTCTAA
| PANTHER |
Na/ntran_symport (IPR000175) - T[10-542] 7.0E-198 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[19-545] 81.643 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[20-540] 2.22E-147 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[28-49] 1.3E-50 - T[223-240] 1.3E-50 - T[305-325] 1.3E-50 - T[359-378] 1.3E-50 - T[439-459] 1.3E-50 - T[481-501] 1.3E-50 |
| Pfam |
Na/ntran_symport (IPR000175) - T[56-541] 3.0E-146 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[82-102] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A5_HUMAN | 41.391 % | 450 | 2.04E-149 |
| S6A13_HUMAN | 38.049 % | 416 | 1.23E-138 |
| SC6A1_HUMAN | 37.52 % | 431 | 1.45E-144 |