Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S210.g05430.01.t

Possible name(s)

ATP6V1C1; ATP6V1C2

Gene model

Phmamm.CG.MTP2014.S210.g05430

Location

S210 [109,448 / 111,474]

Sequences

Amino acid sequence

Length: 284

>Phmamm.CG.MTP2014.S210.g05430.01.p
MAEYWIISAPGDKTPQQTYERLHKATIGQGGGNNLSHNYKFHIPELRVGTLDSLIGLTDD
LSKLDIFAEGVCRKVSTYMGDVLEDQKDKLSSNLKAGDMTLPNYMHHFQWNMAKYPVKQS
LKSLAEIISKVVNQVDADLRTKSQAYNNLKSNLQNMERKATGSLLLRNLRQIVKKDDFIL
DSEYLQTILVAVPVAQFDEWDKHYETLTEFVAPRSSRLLYQDEEYGLFAVTIFRKVFEEF
KYNCGRNKFFVRDFQYSEQDMHSDKDQLNKLASDKKKMLVTKSL

Nucleotide sequence

Length: 1,358

>Phmamm.CG.MTP2014.S210.g05430.01.t
GATATAACAGTTTAAAATGGCAGAATATTGGATTATTAGTGCCCCAGGTGACAAAACACC
TCAGCAAACCTATGAAAGATTGCACAAAGCCACTATTGGACAAGGTGGTGGCAATAATCT
CTCCCATAACTACAAGTTTCACATTCCTGAATTAAGAGTTGGAACTCTTGACTCGCTTAT
TGGTCTTACTGATGATTTGAGTAAATTGGACATTTTTGCTGAAGGTGTTTGTCGGAAAGT
TTCAACCTATATGGGAGATGTTTTGGAGGATCAAAAAGACAAACTGTCAAGCAACTTGAA
AGCTGGAGATATGACATTGCCGAACTACATGCACCACTTTCAATGGAACATGGCCAAATA
CCCTGTAAAACAATCTCTGAAGAGCCTTGCTGAAATTATCTCGAAAGTGGTCAATCAAGT
TGATGCTGATCTAAGAACCAAGTCCCAAGCCTACAATAATCTTAAATCAAATTTGCAGAA
TATGGAAAGAAAGGCAACCGGAAGTTTACTGTTGAGAAATCTAAGACAAATTGTAAAGAA
AGATGATTTTATCTTGGATTCTGAGTATTTGCAGACTATACTGGTAGCTGTACCAGTGGC
ACAATTTGATGAATGGGACAAACACTATGAAACTCTTACCGAATTTGTAGCACCAAGATC
ATCAAGACTACTTTACCAAGATGAGGAGTATGGGCTGTTTGCTGTTACAATTTTTAGAAA
AGTATTTGAAGAGTTCAAATATAACTGCGGCAGAAACAAGTTTTTTGTTCGTGATTTCCA
ATACAGCGAACAGGACATGCATAGCGACAAGGATCAACTTAACAAACTTGCTTCTGATAA
AAAGAAAATGCTGGTAACAAAATCGTTGTGATTTTACTTTAAATTTTGCTAAATTGCTTG
TAATTTTAGGGCCCCCTGCTTCGATGGCTGAAAGTGAATTTTAGTGAAGCTTTTGTGGCT
TGGATGCATGTGAAAGCTCTAAGGGTGTTTGTAGAATCGGTGCTCAGATATGGCCTTCCT
GTCAACTTTCAAGCTGCAGTTTTGGAACCTCAGAAGAAACAACGTAAAAGGTTGCGAGAA
ACACTCAACAGCCTTTATGGGGATCTTGACAGCACTGGTTTAAGTGCTGTTGATGAGGAA
GCTCTCCCAGGACTTTCACTTGGAATGCAAGAGTATTATCCGTATGTGTTTTACAAAGTT
GTCCTGGACTTCGACACTCGCTCTTTATGAGAAGCTACTATAAAACCACTTGTGCAATAT
TTGTATGTCTTACATGTTTGTGAAAAACTTTCTACACAGCTATATGTCTTGGTGAATGAT
TGTTCTATAAGCTCTGTTTGCCACAATTAAAACTGACT

InterProScan

PANTHER	ATPase_V1-cplx_csu (IPR004907) - T[1-278] 2.8E-116
SUPERFAMILY	Vac_ATP_synth_c_sf (IPR036132) - T[1-279] 9.94E-102
Pfam	ATPase_V1-cplx_csu (IPR004907) - T[4-278] 3.0E-109
CDD	ATPase_V1-cplx_csu (IPR004907) - T[4-278] 1.11614E-125

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATC1_HUMAN	57.401 %	337	1.94E-115
VATC2_HUMAN	48.014 %	278	6.07E-92