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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S210.g05430.02.t

Possible name(s)

ATP6V1C1; ATP6V1C2

Gene model

Phmamm.CG.MTP2014.S210.g05430

Location

S210 [109,576 / 111,458]

Sequences

Amino acid sequence

Length: 385

>Phmamm.CG.MTP2014.S210.g05430.02.p
MAEYWIISAPGDKTPQQTYERLHKATIGQGGGNNLSHNYKFHIPELRVGTLDSLIGLTDD
LSKLDIFAEGVCRKVSTYMGDVLEDQKDKLSSNLKAGDMTLPNYMHHFQWNMAKYPVKQS
LKSLAEIISKVVNQVDADLRTKSQAYNNLKSNLQNMERKATGSLLLRNLRQIVKKDDFIL
DSEYLQTILVAVPVAQFDEWDKHYETLTEFVAPRSSRLLYQDEEYGLFAVTIFRKVFEEF
KYNCGRNKFFVRDFQYSEQDMHSDKDQLNKLASDKKKMLGPLLRWLKVNFSEAFVAWMHV
KALRVFVESVLRYGLPVNFQAAVLEPQKKQRKRLRETLNSLYGDLDSTGLSAVDEEALPG
LSLGMQEYYPYVFYKVVLDFDTRSL

Nucleotide sequence

Length: 1,158

>Phmamm.CG.MTP2014.S210.g05430.02.t
ATGGCAGAATATTGGATTATTAGTGCCCCAGGTGACAAAACACCTCAGCAAACCTATGAA
AGATTGCACAAAGCCACTATTGGACAAGGTGGTGGCAATAATCTCTCCCATAACTACAAG
TTTCACATTCCTGAATTAAGAGTTGGAACTCTTGACTCGCTTATTGGTCTTACTGATGAT
TTGAGTAAATTGGACATTTTTGCTGAAGGTGTTTGTCGGAAAGTTTCAACCTATATGGGA
GATGTTTTGGAGGATCAAAAAGACAAACTGTCAAGCAACTTGAAAGCTGGAGATATGACA
TTGCCGAACTACATGCACCACTTTCAATGGAACATGGCCAAATACCCTGTAAAACAATCT
CTGAAGAGCCTTGCTGAAATTATCTCGAAAGTGGTCAATCAAGTTGATGCTGATCTAAGA
ACCAAGTCCCAAGCCTACAATAATCTTAAATCAAATTTGCAGAATATGGAAAGAAAGGCA
ACCGGAAGTTTACTGTTGAGAAATCTAAGACAAATTGTAAAGAAAGATGATTTTATCTTG
GATTCTGAGTATTTGCAGACTATACTGGTAGCTGTACCAGTGGCACAATTTGATGAATGG
GACAAACACTATGAAACTCTTACCGAATTTGTAGCACCAAGATCATCAAGACTACTTTAC
CAAGATGAGGAGTATGGGCTGTTTGCTGTTACAATTTTTAGAAAAGTATTTGAAGAGTTC
AAATATAACTGCGGCAGAAACAAGTTTTTTGTTCGTGATTTCCAATACAGCGAACAGGAC
ATGCATAGCGACAAGGATCAACTTAACAAACTTGCTTCTGATAAAAAGAAAATGCTGGGC
CCCCTGCTTCGATGGCTGAAAGTGAATTTTAGTGAAGCTTTTGTGGCTTGGATGCATGTG
AAAGCTCTAAGGGTGTTTGTAGAATCGGTGCTCAGATATGGCCTTCCTGTCAACTTTCAA
GCTGCAGTTTTGGAACCTCAGAAGAAACAACGTAAAAGGTTGCGAGAAACACTCAACAGC
CTTTATGGGGATCTTGACAGCACTGGTTTAAGTGCTGTTGATGAGGAAGCTCTCCCAGGA
CTTTCACTTGGAATGCAAGAGTATTATCCGTATGTGTTTTACAAAGTTGTCCTGGACTTC
GACACTCGCTCTTTATGA

InterProScan

PANTHER
ATPase_V1-cplx_csu (IPR004907) - T[1-379] 1.1E-165
SUPERFAMILY
Vac_ATP_synth_c_sf (IPR036132) - T[1-376] 1.28E-139
CDD
ATPase_V1-cplx_csu (IPR004907) - T[4-376] 1.65718E-180
Pfam
ATPase_V1-cplx_csu (IPR004907) - T[4-372] 2.1E-152

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VATC1_HUMAN 59.947 % 480 3.23E-170
VATC2_HUMAN 46.136 % 385 2.95E-132