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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S211.g05449.01.t

Possible name(s)

WNT5A; WNT5B; WNT6

Location

S211 [74,783 / 91,833]

Sequences

Amino acid sequence

Length: 586

>Phmamm.CG.MTP2014.S211.g05449.01.p
MSRAKSQPLPADIYSRITERTSLDDMSRAKQICCQRGSQLSDTVAAATKLRSQSVTPQSS
RGSFPATYCRKRRAIEDRTARRGVDAIISTDSDKYSNITTTWDSTERLATDQFSSSTDLV
LEPSIPRSFELSKFSTISRQQLESTKRLHRRAIKQGMTSSPTSSVTRIRAGNCGWHWFSM
AVMLVLLCLNGVSAMWWSPGSDSKLIDTRRLCQWARRNGGEAARMCRKESNTINEIRHGI
DRGLRSCSEDLRHDRWNCSQAKKVYFGNVMRKDLRETAYVQALTAAAVTYQITLACTKGR
LNCGCSEIARQQRRSILLMEAEKRRRTVDVDSLDELVEEFEWGACGDNIEFGSLKAMEFM
DIQRRKVEAAKGNITEAVYVHNFEAGQMTIVDNMRNKCQCHGLSGSCTLWTCWPIMPRFV
EVRQRIRHKYDYAIRVQASADGTSLVPRMRSRPRFPRHSLATNRIQGFGFNQARHRATNK
LVRGNRVRTVERKRRAARVIRPNDLIFLQSSPRFCAPNKSKGSLGTLGRRCDPTLTGLGS
CSYLCCGRGYREEVHTFTEKCNCQFVYCCELKCDDCVRHEKRYYCL

Nucleotide sequence

Length: 4,860

>Phmamm.CG.MTP2014.S211.g05449.01.t
GTTTAGAGACGACAGGGTTTTAACAACTTGTAAAAACAGTAAACTCTGGAAAAACCTTCT
CACCTCGTAAAAAGCTCGCATTCGGGAAGAAAAGAGGACGCTTTGGGATACGTAAAAGTA
CTGCACTCTTTATTGCACCTCAACAGTTCGGGTTGCGCAATTGCGAAAGTGATCAGCAAT
TGATCAAAGAAAGGGACTTGACGCTTTCAGACACACAGACTACGCCTAGAGGTTGTTTAT
GAAATCTCGGCGCTAAGTGAAATCAGCCGATGTTTGCCATTTGAAGGTGGCAAGTGTTTG
TGAAGGAGCCAGCGACGAAATGAGCAGAGCAAAATCGCAACCCCTTCCCGCTGACATTTA
CAGTAGGATTACAGAGAGGACGAGTTTGGACGACATGAGCCGCGCTAAGCAAATTTGCTG
CCAGCGGGGCTCGCAACTATCAGACACAGTAGCTGCGGCAACAAAACTCAGGAGTCAATC
AGTAACGCCCCAGTCGTCAAGAGGGAGTTTCCCGGCAACGTATTGCCGAAAACGAAGAGC
GATTGAAGACAGAACAGCGCGGCGAGGCGTTGACGCGATTATTTCAACCGACAGTGACAA
ATACAGCAATATTACCACGACTTGGGACTCCACCGAACGCTTAGCGACCGACCAATTCAG
TTCCTCAACAGATTTGGTTCTAGAACCTTCCATACCTCGCAGCTTTGAACTTTCAAAATT
TTCGACGATTTCGAGGCAGCAACTTGAGAGTACGAAACGTCTTCACCGCCGCGCCATTAA
GCAAGGGATGACGTCATCGCCTACGTCATCAGTGACGCGGATTAGAGCTGGGAATTGCGG
ATGGCATTGGTTTTCGATGGCGGTTATGCTGGTGTTGCTTTGCTTGAATGGAGTATCAGC
AATGTGGTGGTCCCCTGGCAGCGATTCAAAACTCATTGACACAAGAAGACTCTGTCAGTG
GGCAAGAAGAAACGGTGGCGAAGCTGCCCGCATGTGTAGAAAGGAATCCAACACTATAAA
CGAGATTCGTCATGGGATTGACCGTGGATTGAGAAGTTGTTCCGAAGATTTACGACACGA
TCGGTGGAACTGCTCACAGGCTAAAAAAGTTTATTTCGGAAACGTTATGAGAAAAGACCT
CCGCGAAACGGCATACGTTCAAGCTTTAACAGCAGCTGCAGTGACATATCAAATCACATT
GGCTTGTACCAAGGGAAGATTAAACTGTGGATGTTCCGAAATTGCAAGACAACAAAGAAG
AAGTATTTTGCTCATGGAGGCGGAAAAGCGTCGCAGAACTGTGGATGTAGATAGCCTTGA
TGAGCTAGTAGAAGAATTTGAATGGGGGGCGTGCGGCGATAATATCGAGTTTGGGAGTTT
GAAGGCAATGGAATTCATGGATATCCAGCGTAGGAAGGTGGAGGCTGCCAAGGGAAATAT
CACTGAGGCGGTCTACGTTCACAATTTCGAGGCCGGACAAATGACAATCGTGGACAACAT
GCGAAACAAATGTCAATGCCATGGACTATCTGGGAGTTGTACATTATGGACTTGCTGGCC
AATTATGCCTCGTTTCGTCGAAGTCCGGCAACGTATACGTCACAAATACGACTACGCAAT
CCGGGTGCAGGCTAGCGCGGATGGCACGTCACTGGTTCCACGCATGCGCAGTAGGCCCCG
ATTCCCGCGTCATTCACTTGCCACAAACCGTATACAAGGCTTCGGTTTTAATCAAGCGCG
CCACCGAGCGACAAATAAACTCGTGCGTGGTAACCGCGTGAGAACGGTAGAGCGCAAAAG
AAGAGCGGCACGTGTCATACGACCTAATGACTTGATTTTTCTGCAGTCCTCGCCGAGGTT
TTGTGCTCCTAATAAGTCTAAAGGCAGTTTGGGGACTTTGGGACGAAGGTGTGATCCAAC
GTTGACTGGTTTAGGCAGTTGTTCTTACTTGTGCTGTGGCCGAGGCTATAGAGAAGAAGT
CCACACCTTTACGGAGAAGTGCAACTGTCAGTTTGTTTATTGCTGCGAACTGAAATGTGA
CGATTGCGTTAGGCACGAGAAGAGGTATTACTGCTTGTAGCACATGCCTGGGAGTTTATA
TACAACACCTAGTTGTTGAGTTTCACCACTTGAGGTCGTAGAGAGCGAATTGGAAATATC
CCACCGGTGGAAAAAACGTCTTTGTGAACGAAACGTTTTTTGAGAGAGGTTTCAAACAGA
AGAGAGATAAAATCCAACAAAATACCGAATAAATTGCTTTATTGCAAAGAACTTTTTCTA
CACATTCAATATGAAAGTCGAACAACAGATTTTTTTGAATCGCTAAAGGATTCTGTGCTA
TGTTCTTGCCAAGACAAAGCCACAACACAGAGGAAACACACTAACAAACTTGTTGAACGA
TAATTATCTGATTGCTGCTGGCGGCTAGGTTATATGTTTTGCGGATTGTACCTTACAAAT
GTGTTGTATTTTGGTACAGTACCTTACACGTTGTGAATGTTTTGTTTTCTTTTGCAATTT
TAATGTTCCGAATGTGGTATTTTTTTCCCTTTTACACAACCGTACTACACAAGGCACGTA
CTAAAATTTGCTAGACAACCGTTTCTAAGACAAAACTAGTGTAAGTTTGTCTAGACATTA
AGCAATGTTATGGTTCATATTTCAAACAACGTACTATACTGTTGGTCGATGATTACTTCT
TGTCAACACGCTCAAAAAACTTTGGTGACACTTTGGAAACAATAAACTCAAAAATAATAT
CCCATTTAAATAAGTATCATGTAATAAAAATCTGATTTGCGAACGAAGACCTAAAAATAT
ATGGGTGAGTTTTTGCATTGCGATTTTTAAGTACCGATTGGTCAAAATACAAGTGTTCTA
TTTTGTCAAACACTAAACGTCACAGCTCCGGCTATAATGACGTCACATATATTACGTAAT
AAGAGATTGGTCTCCATAGTTACTATTCAAAATCTGAAATGTTACTGATCTTGTGCTTTG
TAATTCATTCCTTTGTAGACAAAAACACCTAGCTACTCAGACGAACCTAAAACGCATATT
GACGTAATGCATATAACGCCACAATAAAGTCATTTGGAAAGATCTGAAACCCATATTGAC
GTAATGCATATAACGCCACAATAAAGTCATTTAGAAAGATCTCATCCTAACAAAACTTTG
GCACAAATTTTACATTACACATTTTTTCTCAAACTCTTGTACAATGTATTTGTGTCTTGC
TTTTCTATTGTGCTATTGAACAAATCTTGTGTCAGTGTTGCTGTCGTTTATTTATTGCGT
CACACTCGCCCCTTATTACGTTGTTTTCTTTTTTTGAGATTCGTCTTTAGAGTTGAACGG
TTGTTCAACAATTCAAGACTCGTTCGTGAAAAAATAAGTCTTGGACTGTTGCTGTACTCT
GTTCTTTTGTAATCTACAATTCACAGTTCGTCGGTTCGAATCCGATGTTGTCGGCAAAAA
TTTCCATACAGATTTTTAATTATTCCTGTTACAGTAAGGCAAAGAACAATTTAAACACTT
TGAAGTGGATATGACCCGAATATCGCTTAATTAAAAAACTGCACGCTTTACGCCATCTGA
CCTTGAGAAAATACGCGAAAATGGCATAAAATCACTTGCTTACAAAAACAATATGAAACA
CATGATAAATTATCATTAAGAAATCTCACTTAAATATTATGCCAATCCTTATGCCGTATT
AATAAGCGCACAACAAGTGAGACGTAAAGCCAAGATTAACTTCTTGCTATTACCTCACAT
GAGTAAATATCAAACTACAGTAAACCACGGCCAATCCGGACTCGTTTGGAACAAAATAAA
AAGTCCGCATTGGGCGAAGATCCCGATTAACCGATGTCGATTAGTTCACGCCTTCCCACA
TAGCAAATCATTTGCACCTCGAGTTTTTTCCGAATTAGGCGAAGATCCGGTTTAATCGAG
GTTTACTGTATATCTCAAGTATAGTTTAAAAAGCTACTGCGTGAAAAAGTACTAGGACAG
CCATGTGAGCAAAAGTTTGGCAAAATGATCATGTAAATACATATTTTATCGCAGTTTATC
ACTTCCGTATTTTTAGACCTTAAAATATCCCGAGGAAATAGACTTGGGTCCATTGCGAGG
TGCAGAGCCATGTGACCATTCCCAAGTCTGGATTGGCACCGTAACCGGCCCACCGCGATG
GTCAAGTTTGACGTAGCACCTGTAATGACGTAGGATAAATTTATGCTACAGCTGTGGACC
AGAATGTGTGAAAAAAAAGAATGTGTTAGCTGTTGATTGTTACAGCTTTTATAATTTTGG
TTTGTATTCCGGGAGTAAAATACCATGAACATGTTAGATCAGTGGTTCCCAACCGGGGAC
GAATTTTAAAACTTGATGGGAGGAACTTCAATTTGAAGCCTACATTTGAGTCATAAATAA
ACACTTAAGCTGTGCGAAAATAACCTGTGAAGTTGATAAAAGACCCGATTTTAAAGTATA
TTTGTATGGTTAATTATCTACTATGTAGTCTATTGGGCAGCAACAAAAATGTTTTGAATT
GTCAAGAGAGTATTTCCACGATAAAGGTTGGAAACTAATGTGAAATTTAACCCTATCCAG
TAACCAGCAGCAACGATTTGAACACATTCTTATGAGTTTTAACATGTGTTGACATATTAT
CTTGAGGTAGGTCCAATAAAGATAATGCCTTTACTGATACAACTTACTTTCTATTAGGCC
TGGTCACATGACAAAGTGTGATGAGTGCCAATTCTAGTTCCGGACTTTTTCCTATCATCA
CCCCACTCAACGGTTTCATGTAATTGTCCCATTGGAACCTTGCTCCAAAAATGTTCGGCT

InterProScan

PANTHER
Wnt (IPR005817) - T[181-586] 4.5E-112
SMART
Wnt (IPR005817) - T[214-586] 1.3E-76
Pfam
Wnt (IPR005817) - T[222-585] 4.7E-89
PRINTS
Wnt (IPR005817) - T[275-289] 8.3E-18 - T[340-352] 8.3E-18 - T[399-413] 8.3E-18 - T[504-515] 8.3E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
WNT5A_HUMAN 32.346 % 193 5.11E-56
WNT5B_HUMAN 31.608 % 186 8.06E-54
WNT6_HUMAN 34.343 % 232 6.01E-71