Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2146.g16262.01.t

Possible name(s)

ATL1; ATL2; ATL3

Gene model

Phmamm.CG.MTP2014.S2146.g16262

Location

S2146 [1,065 / 4,282]

Sequences

Amino acid sequence

Length: 587

>Phmamm.CG.MTP2014.S2146.g16262.01.p
MGEALWITRVKNKKTIVINKDAVDKLFANDEVKNAPICIYSIAGATRKGKSLFMSLMLQY
LEFKSKNEANEWRRNESVALSKGFEWKDGPDGVTQGIVIWSKPCWLETNEGKVAVFLMDT
QGLFDKEACESVDMQLFTLSTYLSSYQIFNLDTVIDANDLDKLKVFCNFYDKVISEDKWK
SYQCLLFLLRNWQNMDYEFGHVGGRRYTKTKFEEGEVSAEVAGMYKKIKQSFQSLDCALL
PHPGKRITQRRPNAGVPTIDDVDDDFLESCDLVFEEMFSNPAVKKLRAEPLVGIDITNLA
YTISNLMETRQFNEHVMYKACVQTHLQKITIRCEEGLFNSIKGKMERKYRSKQEIKQIHS
EAVHDAMQNFDSEAKGGNPAEIRRHRDKLFSSLMDRHFMFDCYNNYLQAGVIELYEILLK
ECAEHVLTKNNGTPLDQKLEATRMFKSKSVQDPLDAEIREKFINRLGNLFDNQTGYEFRT
ILKKLLSGKSATEQHMRQIQTEGLDQFEQEIKNMDLPVLSHDQKSSFEIALEAQMTNWKK
INMFHSEAFPNSTGWDEFRRKLKKAITYPFSQWQWKKVIFRRPESWR

Nucleotide sequence

Length: 1,764

>Phmamm.CG.MTP2014.S2146.g16262.01.t
ATGGGTGAAGCGCTTTGGATAACTCGTGTGAAGAATAAAAAAACAATCGTCATCAATAAA
GATGCTGTTGACAAACTGTTTGCCAACGATGAAGTAAAGAATGCTCCAATCTGCATTTAC
TCTATTGCTGGTGCAACAAGAAAAGGAAAATCTCTCTTTATGTCCCTTATGCTTCAGTAT
CTAGAATTTAAGTCCAAAAATGAGGCAAATGAATGGAGGAGAAACGAATCTGTTGCGTTG
AGCAAGGGATTTGAGTGGAAAGATGGACCAGATGGTGTCACACAGGGCATTGTTATTTGG
AGCAAACCGTGTTGGCTTGAAACAAATGAGGGAAAAGTTGCTGTTTTTCTCATGGATACC
CAGGGTTTATTTGACAAAGAAGCTTGTGAATCTGTTGATATGCAACTTTTTACTTTGAGC
ACTTATCTGAGTTCGTATCAGATATTCAACTTGGATACGGTGATTGATGCCAACGACCTT
GATAAACTTAAGGTGTTTTGTAACTTTTACGATAAAGTTATCTCAGAAGACAAATGGAAA
TCATATCAGTGTTTACTATTTTTATTGCGGAACTGGCAAAACATGGACTACGAATTCGGG
CATGTTGGAGGGAGAAGATACACAAAGACAAAATTCGAAGAAGGCGAAGTGTCCGCCGAG
GTGGCGGGCATGTACAAAAAAATTAAGCAATCGTTTCAATCACTTGATTGTGCATTGTTG
CCGCATCCTGGGAAAAGAATCACCCAGCGCAGACCCAATGCTGGAGTTCCAACGATTGAT
GATGTTGATGATGACTTCCTGGAAAGTTGTGATTTAGTGTTTGAGGAAATGTTTTCCAAC
CCAGCAGTAAAAAAGCTGAGAGCTGAACCATTGGTTGGAATCGATATTACAAACTTGGCT
TACACAATCTCAAACCTGATGGAAACTCGTCAGTTTAACGAACACGTCATGTACAAAGCT
TGTGTACAAACTCACCTGCAAAAAATTACAATTCGATGCGAGGAAGGTTTGTTCAACTCC
ATCAAGGGGAAAATGGAACGCAAGTATCGATCGAAACAGGAAATCAAACAAATCCACAGC
GAGGCTGTTCACGATGCCATGCAGAATTTTGACTCGGAAGCAAAGGGCGGGAATCCTGCT
GAAATCCGTCGACATCGCGACAAGCTGTTTAGCTCCTTGATGGACCGTCATTTTATGTTT
GATTGCTACAACAATTACTTACAGGCAGGAGTGATCGAACTGTATGAAATATTACTAAAG
GAATGTGCTGAACATGTTCTCACAAAGAACAATGGGACTCCTTTGGATCAAAAATTGGAA
GCTACACGGATGTTTAAAAGTAAATCTGTACAAGATCCACTTGACGCTGAGATTAGAGAA
AAATTTATAAACAGACTTGGCAATTTATTTGATAACCAAACTGGTTACGAGTTCAGAACC
ATTTTAAAGAAACTGTTAAGTGGCAAAAGTGCAACCGAGCAACATATGAGGCAAATACAA
ACAGAGGGTTTAGATCAGTTTGAACAAGAGATCAAAAATATGGACCTTCCAGTCTTATCA
CATGACCAAAAATCATCCTTTGAAATTGCACTGGAAGCTCAAATGACCAATTGGAAGAAA
ATCAACATGTTCCATTCAGAGGCTTTTCCAAACTCGACCGGGTGGGATGAGTTTAGGCGT
AAACTAAAAAAAGCTATCACATATCCGTTCAGTCAATGGCAATGGAAAAAAGTCATTTTT
CGCAGGCCTGAAAGTTGGCGTTAG

InterProScan

SUPERFAMILY	P-loop_NTPase (IPR027417) - T[1-196] 1.06E-15
Pfam	Guanylate-bd_N (IPR015894) - T[14-285] 1.9E-38
ProSiteProfiles	G_GB1_RHD3_dom (IPR030386) - T[34-285] 16.602

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ATLA2_HUMAN	26.98 %	144	1.32E-36
ATLA1_HUMAN	32.117 %	148	2.73E-38
ATLA3_HUMAN	33.61 %	141	6.81E-36