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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'
  2. Molecular Tool 'C6ST7-MO'
  3. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2148.g16265.01.t

Possible name(s)

NLRP2

Location

S2148 [14,078 / 18,459]

Sequences

Amino acid sequence

Length: 486

>Phmamm.CG.MTP2014.S2148.g16265.01.p
MFITSAQMADNDSDFEGLARLAWNQTCKISEPNEPHEDLSVFLSTFHDETANFRLEILKH
GGDFSHNVWKFYFAAFYAAVFLPEQQLKIFVNEFSPETFPIVKYLFGFLNRNIQLQVQEH
VKHKKITNRTQLLTTVLCGLFSQWKPEASNSYVLIYEAQSDDIFKKITNQLPLDIEVSEY
SMRQVASLTAALCGITSIICKSDSTHNLTFDGIKLLQGSSYILTKCLHKINRLEFYNCRI
EERDIQHLAEKISKLDKPMKELTLSYNPISDKGAEALATCLHNVDRLGLWMCGITNHGTR
ALSSSINKRSNPMEYLSLGRNQIGNDGATYLATCIHNIDKLDLHSCAITDDGLVELSIAI
YKRPHPDDYEFISTTSSAVGLEGERLEVGGCIVEIPQNALWQVTTIKLTSCYGKRSGTLK
DLSEIGNEYKLVIESNDRTIYGNKSQGDFFMNPFPETALKDAVIEESKAASLTSKDGVIV
VRIDEF

Nucleotide sequence

Length: 1,461

>Phmamm.CG.MTP2014.S2148.g16265.01.t
ATGTTTATCACATCCGCTCAAATGGCAGACAATGATTCAGATTTTGAAGGACTAGCACGT
TTAGCATGGAACCAAACTTGCAAGATATCCGAGCCCAATGAGCCACACGAGGATTTGTCC
GTGTTTTTATCTACATTTCATGACGAAACAGCAAATTTCCGACTTGAAATTTTAAAACAT
GGAGGTGATTTTTCTCATAACGTTTGGAAATTTTACTTCGCGGCGTTTTATGCTGCAGTT
TTTCTGCCAGAACAGCAATTGAAAATTTTTGTAAACGAGTTCTCTCCAGAAACGTTCCCA
ATCGTCAAATACTTGTTCGGCTTTCTCAACCGAAATATCCAACTACAAGTGCAAGAACAT
GTAAAACACAAAAAGATAACAAACAGGACGCAACTGTTAACAACGGTGTTGTGCGGTCTC
TTTTCGCAATGGAAACCAGAGGCGAGCAATTCTTATGTTCTGATTTACGAAGCACAGAGC
GACGACATTTTTAAGAAAATTACCAATCAACTACCATTGGATATTGAAGTTTCGGAGTAT
TCCATGCGACAAGTGGCTTCATTAACAGCAGCATTATGTGGAATAACGAGTATAATCTGC
AAGTCAGACTCCACACACAACTTAACTTTTGACGGGATTAAACTGCTCCAAGGATCATCG
TATATTCTTACCAAATGTCTACACAAAATAAACAGATTAGAGTTTTACAACTGCAGAATA
GAAGAAAGGGATATTCAACATCTTGCTGAAAAAATTTCCAAGTTGGACAAGCCCATGAAA
GAGTTAACGCTCAGCTACAATCCAATCAGCGACAAAGGTGCAGAAGCGTTAGCAACCTGC
TTGCACAATGTTGACCGACTTGGTCTTTGGATGTGTGGAATCACCAACCATGGAACAAGA
GCGTTGTCATCATCCATCAACAAACGGTCAAACCCGATGGAATACTTATCTCTTGGGCGC
AATCAAATTGGAAACGACGGAGCAACGTATTTAGCGACTTGCATTCATAATATTGATAAA
CTTGATCTTCATAGTTGTGCAATAACAGATGATGGATTAGTTGAGTTGTCAATAGCAATC
TACAAACGTCCACATCCGGATGACTACGAATTTATCAGCACCACGTCATCAGCTGTTGGT
TTGGAGGGAGAAAGATTGGAAGTTGGTGGATGCATTGTTGAAATCCCACAAAACGCTTTA
TGGCAAGTAACCACTATCAAGCTCACTTCATGCTATGGAAAACGAAGTGGAACGCTAAAG
GATCTCAGTGAGATTGGAAATGAGTACAAACTTGTGATTGAATCCAATGACCGTACAATT
TATGGAAATAAAAGTCAAGGAGACTTCTTTATGAATCCATTTCCTGAAACCGCCCTAAAA
GATGCAGTCATAGAGGAGTCAAAAGCTGCTTCATTGACAAGTAAGGATGGAGTTATAGTT
GTTCGGATTGATGAGTTTTAA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[178-365] 2.2E-25
Pfam
Leu-rich_rpt (IPR001611) - T[259-278] 0.0011 - T[312-332] 0.021 - T[340-357] 0.88

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value