- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C13.20.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Boleac.CG.SB_v3.S616...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S214.g05510.02.t
Possible name(s)
LRP5; LRP6
Gene model
Location
S214 [97,335 / 111,487]
Amino acid sequence
Length: 982
>Phmamm.CG.MTP2014.S214.g05510.02.p
MDFETCCFVLQMNTCLGLLLVLAFCHQTLQSGQECLSGPSVWYSGNQSTTNLGYTCQNWT
AKSPHIPKYTPADGGNHNFCRNPDHDILGTWCYTTNSSKKWDYCNITKCPDDSLVIWTNV
NQVNKTTQLYSLPADPEVVRRQSPSSKINVTVFVGSNPGTTAEFWAVASDYASKQIFFAD
YRTRYLGIYDQTTNDTSLYLEGMGHGIENIAYDWRNRNLYLTDSSMKWVLVADNQFQYYA
PIHKADPDPAYGLALHSTKRFLFFSTYKLQGSKIIRTDLAGKNATTLFAYPEVHDVTGMT
VDYADEKLYWTDFTGYGSLVMSSNFDGTNKTQKYYSGSSIYWGIASFNSILYVTDVHRRI
DNTGALYYHLWWIPKGRNQKGRLNVGNYKLTGKPRGVTVMSRQTEQSPFDPVLVTGSCQA
SPECAHICLPRLNATRECICSIGYTKQGDTGCVTNSVGTRYMLVSDAGQGKIFRVSLDNS
SSNYSVFPMAQASKVTFMTNDGGAGSFVFWSDKQKQKIFKSTINGATARTLVDKVHARFL
AFEPLDQNLFYIDDDTQYIAFADAINGYVTTIMKPDRAQRNKTSIRQLTLDLQMKKVYWT
DTRSTNDQGQLWRMNYDGSQKEIVFDNLNWPHGITIDQKNRILYFTESKRSQIYGISLAL
LANVTGTIPTNRTFYNLKDGKRKNGIVTEIQVINDLIYFNDRTRNYMEVIDPSAANPGAS
PFGPRDFYRIRSMVYYDTSYFIQYINKLGRPCALKGCNSNCVALTRGTSKCLCQDGFNLV
TSNLCTNDGTQRPDNPPSYGVTCPTSKIRVLPPCSNSTPFSWATPAWTDDFTATMNLTLT
SPSITSPATLGPGFHEFSYTATDHSGNVGHCTFDFTVTQTQCRARQGLGTNIIETATICG
DNGPEYNITCASANQLLQFGQDTRSYMTNRCFSSGEWMYPNLNGLQCVDAPTTAPTTLAT
TSRRTTTVQPTTTSRTSTTTST
Nucleotide sequence
Length: 2,963
>Phmamm.CG.MTP2014.S214.g05510.02.t
AGGTTCACCAGATTTAAATGGATTTTGAAACTTGTTGTTTTGTATTACAGATGAATACGT
GTTTAGGATTGTTGTTGGTTTTGGCGTTTTGCCATCAAACCCTCCAATCAGGTCAAGAGT
GTCTGAGTGGCCCCTCGGTCTGGTACAGCGGAAATCAAAGCACCACAAATCTCGGTTACA
CCTGCCAGAATTGGACAGCAAAATCTCCACATATTCCCAAGTATACCCCAGCCGATGGTG
GGAACCACAACTTCTGCAGGAATCCCGACCACGATATACTTGGAACTTGGTGTTACACGA
CAAACTCAAGTAAAAAGTGGGATTACTGCAATATTACTAAATGCCCCGACGATTCCTTGG
TGATCTGGACGAACGTGAACCAAGTTAACAAAACCACTCAACTATATTCATTGCCTGCTG
ATCCTGAGGTTGTAAGACGTCAATCACCTAGCTCAAAGATCAATGTTACAGTGTTTGTGG
GTTCGAACCCCGGCACGACAGCCGAGTTTTGGGCGGTGGCTTCAGATTATGCGTCCAAGC
AAATATTTTTCGCCGATTACAGAACACGGTATCTTGGGATTTACGATCAAACCACCAACG
ACACGTCACTTTACTTGGAAGGCATGGGCCACGGAATCGAGAATATAGCTTATGACTGGA
GGAACAGGAACCTTTATCTCACCGATTCGTCGATGAAATGGGTTCTGGTGGCTGACAACC
AGTTTCAATATTACGCTCCCATCCATAAAGCCGACCCTGACCCAGCCTATGGACTTGCAC
TGCACTCTACAAAGAGGTTTCTGTTTTTCTCCACGTACAAGTTGCAAGGGTCAAAGATTA
TCAGGACGGATTTGGCGGGAAAAAACGCGACCACATTGTTCGCGTATCCGGAAGTACATG
ACGTCACAGGCATGACCGTTGATTACGCCGACGAAAAATTGTATTGGACCGATTTCACGG
GTTATGGAAGTTTAGTGATGAGTAGCAACTTTGACGGAACCAACAAGACGCAGAAATATT
ACAGCGGTTCATCTATATATTGGGGTATCGCCTCCTTCAATAGCATTCTTTATGTGACCG
ACGTCCACCGTCGTATCGACAACACAGGGGCGCTCTACTACCATCTGTGGTGGATTCCCA
AAGGCAGGAACCAGAAGGGAAGGTTGAATGTGGGAAACTACAAACTGACGGGGAAACCCC
GCGGGGTGACTGTGATGTCACGACAGACAGAACAATCGCCGTTTGATCCAGTTTTGGTGA
CCGGTTCGTGCCAAGCCTCACCAGAATGCGCTCACATCTGCCTTCCACGGCTCAACGCAA
CAAGGGAATGCATTTGCTCAATCGGTTACACCAAGCAAGGAGACACAGGCTGCGTCACAA
ATTCTGTCGGAACCCGTTACATGTTGGTCAGCGATGCAGGACAGGGAAAAATTTTCCGAG
TTTCACTCGATAACTCGTCCTCAAACTACTCCGTGTTTCCAATGGCGCAAGCATCTAAGG
TAACCTTCATGACAAACGACGGTGGAGCGGGAAGTTTTGTTTTCTGGTCAGACAAACAAA
AACAGAAAATATTCAAATCCACAATAAACGGAGCCACTGCACGCACACTGGTCGACAAAG
TGCACGCTCGATTTTTGGCGTTCGAGCCCTTGGACCAGAATCTGTTCTACATTGATGACG
ACACACAATACATCGCGTTCGCTGACGCAATCAACGGTTACGTCACCACAATAATGAAAC
CGGATCGCGCGCAAAGAAACAAAACCAGCATTCGACAATTGACACTCGACTTGCAAATGA
AGAAAGTTTATTGGACTGATACGCGAAGTACAAACGACCAGGGTCAGTTGTGGAGAATGA
ATTACGACGGATCGCAGAAAGAAATTGTGTTTGACAACCTCAACTGGCCGCATGGAATAA
CCATTGACCAAAAAAATCGCATCCTCTACTTCACCGAATCAAAGAGATCTCAGATATACG
GCATCTCTCTGGCCTTACTCGCCAACGTAACAGGGACAATCCCCACAAATAGAACATTTT
ACAACCTGAAGGATGGCAAGCGAAAGAACGGAATTGTAACCGAAATCCAAGTAATCAACG
ATCTGATTTACTTCAACGACCGAACGAGGAACTACATGGAGGTGATTGACCCCAGTGCTG
CGAACCCCGGTGCTTCCCCTTTCGGTCCCAGGGACTTTTATAGGATCCGTAGCATGGTGT
ATTACGACACCAGTTACTTCATTCAGTACATAAACAAACTTGGACGACCGTGTGCACTGA
AGGGTTGTAACTCAAACTGCGTGGCTTTAACGCGCGGCACTTCGAAGTGTTTGTGCCAGG
ACGGATTTAACCTTGTGACGTCCAATCTCTGCACCAACGATGGAACGCAAAGACCAGACA
ACCCTCCATCGTACGGGGTGACCTGTCCAACCAGCAAGATAAGAGTCCTGCCTCCCTGCT
CAAACTCAACACCCTTCTCATGGGCTACTCCTGCATGGACAGATGACTTTACAGCAACAA
TGAACCTGACGTTGACGTCACCATCAATTACGTCACCAGCCACGTTGGGACCTGGGTTCC
ACGAGTTTAGTTACACCGCCACTGACCATTCGGGAAATGTTGGACACTGCACGTTTGACT
TCACAGTGACACAAACTCAATGTCGGGCCCGGCAAGGACTCGGAACGAATATAATCGAAA
CAGCAACAATTTGTGGTGACAATGGACCAGAGTATAACATAACCTGTGCATCAGCAAACC
AACTGCTTCAATTCGGACAAGACACAAGGTCTTACATGACCAACCGGTGTTTCAGCTCAG
GAGAATGGATGTATCCCAACCTTAATGGCCTTCAGTGCGTCGATGCACCCACTACAGCAC
CCACAACACTTGCTACAACCAGCAGACGTACAACAACTGTACAACCTACAACTACGTCAA
GAACATCAACAACTACATCTACA
| Gene3D |
Kringle_sf (IPR038178) - T[11-118] 3.3E-25 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[24-115] 3.38E-25 |
| CDD |
Kringle (IPR000001) - T[32-110] 2.07723E-25 |
| SMART |
Kringle (IPR000001) - T[33-111] 4.9E-21 |
| ProSiteProfiles |
Kringle (IPR000001) - T[34-109] 20.479 |
| Pfam |
Kringle (IPR000001) - T[35-109] 7.9E-16 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[79-92] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[121-454] 1.9E-39 - T[455-791] 7.6E-38 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[174-216] 5.005 - T[260-305] 6.35 - T[306-330] 7.0 - T[506-532] 7.859 - T[595-640] 11.943 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[196-237] 34.0 - T[240-284] 8.1 - T[285-330] 4.6E-5 - T[529-569] 45.0 - T[570-621] 1.3 - T[623-663] 11.0 |
| SMART |
EGF-like_dom (IPR000742) - T[417-453] 12.0 - T[751-786] 15.0 |
| Pfam |
SGL (IPR013658) - T[458-681] 2.6E-6 |
| ProSiteProfiles |
HYR_dom (IPR003410) - T[793-879] 15.895 |
| Pfam |
HYR_dom (IPR003410) - T[796-877] 7.6E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP1_HUMAN | 23.794 % | 100 | 3.27E-21 |
| LRP4_HUMAN | 21.186 % | 101 | 1.56E-21 |
| LRP5_HUMAN | 23.038 % | 101 | 9.81E-22 |