- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2160.g16295.01.t
Possible name(s)
TCEA1; TCEA2; TCEA3
Gene model
Location
S2160 [14,516 / 18,237]
Amino acid sequence
Length: 309
>Phmamm.CG.MTP2014.S2160.g16295.01.p
MSNEEEVLRIAKKLDKMAAKKNADNALDVLNVLKKIQISYATLKKTRIGMSVNSIRKQTK
NEEVAVAAKQLIKGWKKLVGNDEPNGNKKPEPRKSDDTEPEISTTIQKEKQIERSNSTSS
FEMDTSATLSLTNNPIRDKCREMLLRGLIADGHSGHSNSRCTFVAAAIEEAIFVEFKDTG
TKYKNRVRSRFSNLKDAKNIGLRMNVLNGVVKPEKVAKMTAEEMASDEMKKLREAYEQEN
IKDHQMAVNEGTKTDMFSCGRCKGKACTYNQLQTRRGGGGGGGGGGGGGGGGGGTFVFCN
DCGNRWKFC
Nucleotide sequence
Length: 1,704
>Phmamm.CG.MTP2014.S2160.g16295.01.t
GCCATTATTGTGCATAGATTTGATTACATATATTTGCTGATATCTTATTCAACCAAAATA
CACAATGAGCAACGAAGAGGAAGTCCTGCGCATTGCAAAAAAATTAGACAAAATGGCGGC
AAAGAAAAATGCGGACAATGCATTGGATGTCTTGAATGTTCTGAAGAAAATTCAAATCAG
TTATGCAACTTTAAAAAAGACGCGCATTGGAATGTCTGTCAACAGTATTCGAAAACAAAC
CAAAAATGAAGAAGTTGCTGTTGCAGCAAAGCAGTTAATAAAAGGATGGAAAAAACTGGT
TGGAAATGATGAGCCAAATGGGAACAAAAAACCGGAACCCAGAAAAAGTGATGACACTGA
ACCAGAAATTTCCACAACTATTCAAAAAGAAAAACAAATTGAGAGAAGTAATTCCACATC
TTCATTTGAGATGGACACATCTGCCACTCTGTCTCTAACTAACAATCCTATTCGTGATAA
ATGCAGAGAAATGCTGTTGAGAGGATTAATTGCAGATGGTCATTCAGGCCACAGTAATTC
CAGATGTACATTTGTTGCTGCTGCTATTGAAGAAGCTATCTTTGTTGAGTTTAAAGACAC
TGGAACCAAATACAAAAATCGAGTGCGAAGCCGATTTAGTAATCTTAAAGACGCAAAAAA
TATTGGCCTTCGAATGAATGTATTGAATGGAGTGGTGAAGCCAGAAAAAGTAGCCAAAAT
GACAGCTGAGGAAATGGCCAGTGATGAAATGAAAAAGCTTAGGGAAGCATATGAACAAGA
AAACATTAAAGACCATCAGATGGCTGTAAATGAAGGCACAAAAACCGATATGTTTTCATG
CGGTCGATGCAAGGGCAAGGCGTGCACGTATAACCAGTTGCAAACCCGCAGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCACATTTGTGTTCTG
TAACGACTGTGGAAACAGATGGAAATTCTGTTGAGTTTAGCGTCGCCCGAAAACCGTCTT
CTGCTTCAGTTTGGCGTTTCGGCCTCTCGTACCAAGAGTGCATTTTGTTTTTGCATTTAT
CTGTTTGGAATGGAAATCGCACGAATCCTGTTAAACTGCTAAGCCATCTCAGCTCATTTA
CCTGCTCAAACTTGCACACTTCAATCGGGTTATTTTAGTTTCCTGTTAAAATTGTTAAAC
ATAACATGAAAACTGAATTCCTCTTGACCTTTGAACCCCAATTATACCATATCAGAGTTT
TGAAGGTATTTTTGAAAACCCGCTGCAGGTGTGTAAAATTGTACTTGCAACCAGTGCCTT
TGGAACACATCAGAAAGCTGCTCTTTCACCAGCCCATCCTGTTGTAGACATTACCCTACA
GTGCACATTCAACGAAGCTTTGTATTATTCTTGTAGTTCGAAAACGTGACATACCGTGTT
GTGTGGCTTCAGCCTTGACAATTTATCCAATGCCCTTCTTATCCGTGTAAGTTGTTCATA
GTTTAAGTCTTGGTGCACATTTTTCACGTTTGTAGAGGGAACTATTAGTGTGTATTTTGT
CAGCCCATGGCTTCAGTGTTTCATACCAGAACGAAATATATAAAAAAAAATTGCTTAATT
ACCGAAATAAAAAATAAAACAGGACTGAACAAGATATCGCTACATTTAATTTCGGTATTT
TGTTCTGAATTTTTTGCGAAAGGG
| PIRSF |
TF_IIS-typ (IPR035100) - T[1-309] 1.5E-83 |
| Gene3D |
TFIIS/LEDGF_dom_sf (IPR035441) - T[1-95] 1.7E-26 |
| SUPERFAMILY |
TFIIS/LEDGF_dom_sf (IPR035441) - T[2-93] 1.83E-24 |
| TIGRFAM |
TFSII (IPR006289) - T[5-309] 2.0E-77 |
| ProSiteProfiles |
TFIIS_N (IPR017923) - T[5-82] 23.709 |
| SMART |
TFIIS/CRSP70_N_sub (IPR003617) - T[7-81] 1.5E-22 |
| Pfam |
TFIIS_N (IPR017923) - T[28-79] 1.3E-11 |
| Gene3D |
TFIIS_cen_dom_sf (IPR036575) - T[123-226] 1.0E-33 |
| SUPERFAMILY |
TFIIS_cen_dom_sf (IPR036575) - T[124-228] 6.41E-30 |
| Pfam |
TFIIS_cen_dom (IPR003618) - T[134-244] 1.1E-36 |
| SMART |
TFIIS_cen_dom (IPR003618) - T[134-235] 2.4E-34 |
| ProSiteProfiles |
TFIIS_cen_dom (IPR003618) - T[136-252] 35.682 |
| ProSiteProfiles |
Znf_TFIIS (IPR001222) - T[255-307] 9.093 |
| SMART |
Znf_TFIIS (IPR001222) - T[257-308] 1.8E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCEA2_HUMAN | 45.687 % | 273 | 3.85E-91 |
| TCEA1_HUMAN | 46.769 % | 257 | 5.9E-85 |
| TCEA3_HUMAN | 42.382 % | 251 | 7.54E-82 |